| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4287 |
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| Symbol | |
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| ID | 8021975 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 891335 |
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| End bp | 892750 |
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| Gene Length | 1416 bp |
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| Protein Length | 471 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644833062 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_002984202 |
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| Protein GI | 241665843 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.191052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.498068 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGCG CAAGGTCTGC CGCGCCATCG AGTCTGGATC CCATCTCCGG ATTGCCCGAC
CGCGGGCGAT TCGTCCAACT GCTGGCTGCC ATGCCTCAGC CCGCACGCCA GGATGCAATC
GGCGCCCTGC TGCTGATCGG CTTCGACCAT TTTGCCGAGG CGACCAACAC GCTCGGGCCC
TTGGCAGCAC GGGAGGTCAT CGCCGAATGT GCATCGCGGC TTGAGGCACT GAGCGTGCCC
GCCGCGGATG GCAACGCACC CATCGTCGGG CGCATCGGCC CCGAGACTTT TGCCGTTGCC
TGCGCAGACT TCGTCTCGGC ACAGGATGTA CACGATCTGG CGCGGCGGAT TTCTGCGGCA
CTCACGCGAC CTTTCATCAC GCATGGTTAC GAGCTGGTCT GCTCTTGCAG TATCGGCATG
ACGCTTTTCG AGGGCATGCC CTCCGATGCG GCACGGCTGA TTGAACAGGC CGACCGGGCG
CTCTATGGTG TTCAGCACGG TGCCGAACCC AGCCCCGCGC TGTATGCCCC GGCGGCCATG
CCCCCAGGCA CGGGCACCAA CGTCGCCCGC GCCGACGGAT ACGACGCCAT CGCCGAGCAC
CCGCGCCTGG CCGCCCAACT GCGCCACGCG CTTGCACGCC GCCAGTTCAG CCTGAACCTG
CAGCCACAAC TGAGCCTGAC CGACGGACGG ATCGTCGGCT ACGAATTCTT GCTGCGCTGG
AGCTCACCCG AGCTGGGAGG CGTGGCACCG GCGGAATTTC TGCCGATCCT GGAGCAGACC
GGCGACATTC GCGAGGTTGG CCACTGGGTG CTCGACAGCG CCGCCCAGAT GCTGGCCGGA
CTGCTGCGCG AAGAATCCGA GCGCGCAGGA CGCAACAGCC GGCATCAGCC GGGCGTGCAT
GCAGCCGTCA ACCTGTCGGT TGCGCAGCTG CTCGATCCGC AATTGAGCGA CGTCGTGCGC
GACATTGCCG CGCGCCACGC GGTGCCGACC ACCCGGCTTG TCTTCGAGAT ATCGGAACAC
ACGCTGCACC GTGCCAACGG CTCGGCGCAG AAAGCGGTGG AAGCCCTGCA CGCGTGCGGC
GCGCGCGTGG CGGTGGAAGA CTTTGGAGCC ACCGCGCACA GCCTCGATTG CCTGGCAACG
TTCCGGCCCG ATCAGGTCAA GCTCGACCAG GCGATCGTCA ACGCAGTGAC CAACGCGAGC
GATCACGCGG TGCTGCAACG CCTGGTGACT GCCGCGCATG GTGCGGGCGT GCCCGTCATC
GCCACGCGCG TGGAAACCGC CGCACAGCTC CATGCCTTGC GGGCCTGCCG GTGCGACGTG
ATCCAGGGCT ATTTGCTCTC GCAACCGTTT CCTGCCCGCT GGATCGACGA CACACAAGAC
GTGATTGCCG AGCGGGCGCG CGATCTGATG CCGTAA
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| Protein sequence | MSRARSAAPS SLDPISGLPD RGRFVQLLAA MPQPARQDAI GALLLIGFDH FAEATNTLGP
LAAREVIAEC ASRLEALSVP AADGNAPIVG RIGPETFAVA CADFVSAQDV HDLARRISAA
LTRPFITHGY ELVCSCSIGM TLFEGMPSDA ARLIEQADRA LYGVQHGAEP SPALYAPAAM
PPGTGTNVAR ADGYDAIAEH PRLAAQLRHA LARRQFSLNL QPQLSLTDGR IVGYEFLLRW
SSPELGGVAP AEFLPILEQT GDIREVGHWV LDSAAQMLAG LLREESERAG RNSRHQPGVH
AAVNLSVAQL LDPQLSDVVR DIAARHAVPT TRLVFEISEH TLHRANGSAQ KAVEALHACG
ARVAVEDFGA TAHSLDCLAT FRPDQVKLDQ AIVNAVTNAS DHAVLQRLVT AAHGAGVPVI
ATRVETAAQL HALRACRCDV IQGYLLSQPF PARWIDDTQD VIAERARDLM P
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