| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4284 |
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| Symbol | |
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| ID | 8021972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 887507 |
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| End bp | 889201 |
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| Gene Length | 1695 bp |
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| Protein Length | 564 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644833059 |
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| Product | phospholipase D/Transphosphatidylase |
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| Protein accession | YP_002984199 |
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| Protein GI | 241665840 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1502] Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.730338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGGGC ACCCGAGGAA CCACCCGACC GCGTCTCTGC GCGCCTGGTT CACCTGCTTG
GCCATCGCGC TGCTGAGCGG CTGCGTCAGC CTGCCGGAGC ACGTGGATCG CCCTGTCACG
ACGGCGCTGC CGAACGCCGA GTCGGCCACG TCGCTTGGGC GGCTTGCGCA GTCAAATGCG
CCGTCGGCGG ATGTGTCGGG CTTCCGGCTG ATTCCGTCGG GCGAAGAAGC CTATGCCACA
TTGCTCACAC TGGCCGACCG GGCAGAACGC ACGCTGGACT TGCAGTACTT CATCATTGAA
AGCGACAACA GCGTGCGCGA GTTGATGCGT CATGTGTTGG CGGCTGCCGA GCGCGGCGTG
CGTGTGCGCA TGCTGGTTGA CGACCTGCAT AGCGACGGGC GTGATCTCGC GTTCCTCAAG
TTCTCGTCGC ACAAGAACAT CGATGTACGC CTGTTCAACC CGTTTCCGGG CGGGCGGATG
TCGAATCTGA CACGGTATCT GAGCGGCGCG GCCGAGTTCC GCCGCGTCAA CCGGCGCATG
CACAACAAGG CCTTCATTGC CGACAACGCG CTGGCCGTGA CAGGCGGGCG CAATCTGGGC
GCCGAATATT TCACGCAAAA TCAGACCACC AACTTTGTGG ATCTCGACGT GCTGGCCGCG
GGGCCGGCGG TGCGCCAGTT ATCGTCGGCA TTCGATGCGT ACTGGAACAG CGAATTCGCC
TATCCGGTGC AGGCGCTGGC GCCCGAGCCG AGCACGGCGC ATCCACCCGA GCCGAAGGAC
GGCAACTATC CGCCGCCGGT GACGATGCCG CATCGGCCGG AAGGGCCGCC GCAGCAGATC
GACGTGCCGA CCCGGCCGGT CGACATGGGG TCCGGTTCTG CCAAGCCGGC ATCCGACCAG
ACCGATCTCG CCAGCCCGGC GCCGGAGCAG CGCCTGCCGC TCAAGCCTGC CCCGCGCGAC
TGGTTCCTGG CCGACCAGAT CGCCCGTGGC CGCCTGCGCC TGGAGTGGGC GCCCGCGCAG
GTGATCGTCG ATCGTCCGGC CAAGGTGTCG GGTGATGACG TGGAACCTGG TGGCGAGCGC
CTTGCCCAGA CGCTCCTGCG TCTGATTGAC GAGGCCGAGC GCGAGGTGGT GCTGATCTCG
CCGTACTTCG TGCCCGGCAA GCGCGGCGTC GAGGTGGCCA AGCGCATGCA GGATCGCGGC
GTGCGCCTGC GTGTGCTGAC CAACTCGCTG GCGGCGACCG ACGCACCCAT CGTGCATGTG
GGCTATGCGA AATATCGTGG CGAGCTGGTC GACGACGGTG TTGAACTGTA CGAGCTGCGC
CCGACCCTGG GCGATCGCCC GAAGATGATC GGCACTTTTC GTTCGTCGCA GGCGAGCCTG
CATGTGAAAT CGATCGTGGT GGACCGCAGC ACGCTGTTTG TCGGCTCGAT GAACATCGAC
CCGCGCTCTA TCGGACTGAA CACGGAAACC GGGTTGATCA TCCGCAGTCC GGTGCTGTCG
GAGGCGGTAG CCCGGCTGTT TGACGACTCG GTGCGCGACA GTGCCTACCG GGTGACCAAG
GATGATGGCC ACTTGCGCTG GACCACGCAC GAGAACGGCA AGGAGGTCGT CGTCGATCAC
GAGCCGGAGG TGGGCCTGGG CCGCCGGACG TGGATCCAGA TGCTGGCGCC ATTGACTCCG
GAAGAACTGC TGTAA
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| Protein sequence | MQGHPRNHPT ASLRAWFTCL AIALLSGCVS LPEHVDRPVT TALPNAESAT SLGRLAQSNA
PSADVSGFRL IPSGEEAYAT LLTLADRAER TLDLQYFIIE SDNSVRELMR HVLAAAERGV
RVRMLVDDLH SDGRDLAFLK FSSHKNIDVR LFNPFPGGRM SNLTRYLSGA AEFRRVNRRM
HNKAFIADNA LAVTGGRNLG AEYFTQNQTT NFVDLDVLAA GPAVRQLSSA FDAYWNSEFA
YPVQALAPEP STAHPPEPKD GNYPPPVTMP HRPEGPPQQI DVPTRPVDMG SGSAKPASDQ
TDLASPAPEQ RLPLKPAPRD WFLADQIARG RLRLEWAPAQ VIVDRPAKVS GDDVEPGGER
LAQTLLRLID EAEREVVLIS PYFVPGKRGV EVAKRMQDRG VRLRVLTNSL AATDAPIVHV
GYAKYRGELV DDGVELYELR PTLGDRPKMI GTFRSSQASL HVKSIVVDRS TLFVGSMNID
PRSIGLNTET GLIIRSPVLS EAVARLFDDS VRDSAYRVTK DDGHLRWTTH ENGKEVVVDH
EPEVGLGRRT WIQMLAPLTP EELL
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