Gene Rpic12D_4249 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4249 
Symbol 
ID8021937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp851991 
End bp853256 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content65% 
IMG OID644833026 
Productputative signal peptide protein 
Protein accessionYP_002984166 
Protein GI241665807 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0577112 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGTCTG TAATGCAGTC GATTCCTCGA TTCGTTGCCG GTGCGCTGCT GACGCTCGCA 
GCAACGGTGG CGCCCGCGCA CGAAGGCCAC GATCACGGTG CCATGGCAGC CAAGCCTGCC
GCAAAACCGC AGCTCGCCAC CACGGCCGCG TTCGACAAAG CTGGGCGTCT GTGGGTGACG
TGGGCGGAAG GGCAGCACGT GGTGGTAGCG TCGTCCGGCG ATCTCGGCAA GACACTGTCC
GCGCCGCAGC GAGTGAACCC GCAACCCGAG CCGATCTACA CCGACGGCGA GAACCGCCCG
AAGGTTATCG CCAGCCCGGA CGGTGCGCTG TATGTGAGCT GGTCGCGCCC GCTCGACGCG
CCCTATACGG GCTTCGTGCG TTTCTCGCGC TCGCTTGACG GCGGCAGGAC GTGGAGTGCG
CCGGTCACCG TCCACCACGA CCGCCAGCCG ATCACGCACC GCTTCGATTC GATCGCGGTC
GACGGCGCAG GCCGCATCTT CGTCACGTGG ATCGACAAGC GCGACCTGCT GCTTGCACAA
GCGGCCAAAC AGCCGTACGC CGGAGCGGCG GTCTACTACA CCGTTTCGAC TGACCGCGGC
GCCACCTTTG CGCCCGAGCG CAAGGTCATC GACCAGACCT GCGAATGCTG CCGCATTGCG
CTTGCCCCCG ATGCCGATGG CCACATGCTC GCACTGTGGC GCAATGTGTT TGCCGGGCAG
ATCCGCGACC ACGCATTGGC AACATTACCC ATTGGTAACA CACCGCTTGC CATCACGCGC
GCGACGTTTT CGGAGTGGCG CGTCGATGCG TGTCCGCACC ATGGCCCCGC GTTGGCCGTT
ACGGCCGATG GTGTGCGGCA CATGGCGTGG TTTTCGGTGC TGCAAGACAA GCCCGGCCTG
TTCTACAGCC GGCTCTCGGC AGACGGCAAG CCAATCGGCG GCGCATGGGC CTTTGGCGGT
TCGGCACAAG CCGGTGCACA GGCATCGCAC CCAGCGATGC TCGCGGCAGA CGGCGCCCTG
TGGCTGGCGT GGAAACAGTT TGCCGACGAC CGCATGCAGA TCCTGCTGCG CAGATCGACC
GACGGCGGCG CGCACTGGAC AGCGCCCGCC AGCGCGGCAA ACACCGATAG TGGGAGCGAT
CATCCGCAAC TGCTCGCGCG CGATGGCCAT GTTTACCTGT CGTGGCGCAC GCAGGCCGAG
GGCTATCGGC TGATCGATAT CAGCAATGTC AGTCCGTCCA ATCCATCATT GGAGGCATCG
AAATGA
 
Protein sequence
MASVMQSIPR FVAGALLTLA ATVAPAHEGH DHGAMAAKPA AKPQLATTAA FDKAGRLWVT 
WAEGQHVVVA SSGDLGKTLS APQRVNPQPE PIYTDGENRP KVIASPDGAL YVSWSRPLDA
PYTGFVRFSR SLDGGRTWSA PVTVHHDRQP ITHRFDSIAV DGAGRIFVTW IDKRDLLLAQ
AAKQPYAGAA VYYTVSTDRG ATFAPERKVI DQTCECCRIA LAPDADGHML ALWRNVFAGQ
IRDHALATLP IGNTPLAITR ATFSEWRVDA CPHHGPALAV TADGVRHMAW FSVLQDKPGL
FYSRLSADGK PIGGAWAFGG SAQAGAQASH PAMLAADGAL WLAWKQFADD RMQILLRRST
DGGAHWTAPA SAANTDSGSD HPQLLARDGH VYLSWRTQAE GYRLIDISNV SPSNPSLEAS
K