| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4201 |
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| Symbol | |
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| ID | 8021889 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 806595 |
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| End bp | 807581 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832981 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_002984121 |
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| Protein GI | 241665762 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCC ATCCGCCCCA CACCGCCCCA TCTGGCCGCC GACGCTGGCT GGCCGCATTG
CTTGGCGCCG GCATGGCGCT GTGCGCAGGC CTGACGCAGG CCGCCGAGCC GACCACGGTG
CGTATCGGCT TTCAGAAAGC CGGACTGCTG GCGGTGCTGA AAGCGCAAGG CGCGCTCGAC
AAACCGCTGG CCGAGCTTGG CTACAAGGTG GAATGGAAGG AATTCCCTGC CGGGCCTCAA
CTGCTGGAGG CGCTCAACAC CGGCAGCATT GAGTTCGGCT ACACCGGCGC GCCGCCGGCT
GTGTTTGCGC AGGCCGCAGG CGCACGCCTT GTCTATGTGG GGGCCGAGCC GGGCGGCAAG
ACCAACGAGG CGCTGTTCGT GCTCGACAGC TCACCCGCGC ACAGCGTGGC TGACCTGAAA
GGCAAGCGCA TCGCGCTGCA AAAGGGCTCC AGCTCCAACT ACCTGCTGGT GCAGCTGCTT
CGTCGCGCCA ACCTCACGGT GCAGGATATT CAGCCGATCT ACCTGCCACC GGCCGAGGCG
CGCGCAGCCT TCGAGAGCGG CGCGGTCGAT GCGTGGGTCG TGTGGGATCC GTATTACGCG
CTGGCACAGA AGGCGTTGAA GACACGCACG CTGGGCGATT TCAGCGAGCT GCCGGTGTTC
AACTTCTACG AAGCCACGCC GGAATTCGTG AACACGCATC CGCGCGCGGT CAATGCCATC
CTGGCCCAGT TGCGCACGGC GGGGCTGTGG GTGAATCAGC ATCCGCAGGA AACCGCCGCC
CTGCTGGCGC CCAAACTCGG CATCGAGCAG CCCGTTGTCG AGACCTGGTT GCGGCGCGTG
CCCTACGGCG TCACGCCGGT CACGCCGCAG ATCGTGGCCT CGCAGCAGCA GATTGCCGAC
CTGTTCCTGC AGCAGAAGCT GATTCCGAAA CCGGTGAACG TACAAAGCGC TGTCTGGCAG
GCGAATTTTC CGGTAGCGGG ATTGTGA
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| Protein sequence | MQSHPPHTAP SGRRRWLAAL LGAGMALCAG LTQAAEPTTV RIGFQKAGLL AVLKAQGALD
KPLAELGYKV EWKEFPAGPQ LLEALNTGSI EFGYTGAPPA VFAQAAGARL VYVGAEPGGK
TNEALFVLDS SPAHSVADLK GKRIALQKGS SSNYLLVQLL RRANLTVQDI QPIYLPPAEA
RAAFESGAVD AWVVWDPYYA LAQKALKTRT LGDFSELPVF NFYEATPEFV NTHPRAVNAI
LAQLRTAGLW VNQHPQETAA LLAPKLGIEQ PVVETWLRRV PYGVTPVTPQ IVASQQQIAD
LFLQQKLIPK PVNVQSAVWQ ANFPVAGL
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