Gene Rpic12D_4191 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4191 
Symbol 
ID8021879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp797319 
End bp798503 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content66% 
IMG OID644832971 
Productfumarylacetoacetate (FAA) hydrolase 
Protein accessionYP_002984111 
Protein GI241665752 
COG category[R] General function prediction only 
COG ID[COG3970] Fumarylacetoacetate (FAA) hydrolase family protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA TCGCCAACCA CTTGCCGCAC GATCTCGAGC ATGCAACGCT CGTCGGTCGG 
GTCTGGCGCA CAACAGAAAA AAGCAAGGGG CCATCCGTCG TGGTGGTGCG CAACGGGGTC
GTGTTCGACA TCACGGAAGC CGTGCCAACG GTGGCAGATC TGTTCGAGCA TCCTGACGCA
CTGGCCGTCG CGCGGCAGGC CCAAGGGGAA AACCTCGGTC GCGTCGAAAC GCTTGTCGAA
CGCTCACTGG CTGCCGATCG TGCGGGCAAC GCGCCAACCC TGCTCGCTCC GAACGATCTG
CAGCCGATCA AGGCCTGCGG CGTGACGTTT GCCGTCAGCC TGATCGAACG GGTGATCGAA
GAGCAGGCAG GCGGCGACCC AGCCAAGGCG CGCGACGTGC GCGCGTCCAT TGCCGGGGTG
GTGGGCTCGG ATCTCTCCAA GATCAAGCCC GGCTCCGATG CGGCCATGCG GCTCAAGGAC
GAACTGCAGC GCCGGGGCGC ATGGTCACAA TACATGGAAG TCGGCATCGG CCCCGATGCG
GAAGTGTTTT CCAAATCGCA ACCGATGTCG GCAGTCGGAT TCGGCGCCGA CGTGGGTCTG
CATCCGGCCT CGCGGTGGAA CAATCCGGAG CCGGAGATCG TGCTGGCGGT CAGCAGCACG
GGGCATGTCG TGGGAGCAGC GCTGGGCAAC GACGTGAATC TGCGCGACAT CGAGGGGCGC
TCCGCGCTGC TGCTGGGCAA ATGCAAGGAC AACAACGGCT CCTGCGCCAT CGGCCCGTTC
GTGCGCCTGT TTGACGAGCG CTTCACGCTC GACACGATCC GCGCGACGCA GGTGTCGCTG
CGTGTTGATG GCGCCGACGA CGGCTTCGTG CTCGACGGCG TGAGCCACAT GAGCGAGATC
AGCCGCGACC CGCTTGACCT CGTCGCCCAG ACCTGCGGAC CGCACCATCA GTATCCGGAC
GGCTTCATGC TGTTTCTCGG CACGATGTTC TCGCCGATCA AGGACCGTGA CGCACCTGGC
GCCGGCTTTA CGCACCACCT GGGCGACCGC GTGACGATCA GCGCCCCGCC CCTCGGCGCG
CTGGTCAACA CGGTACGCCT GTCGACGGAA ATCGCGCCGT GGACGTTCGG TGTCCGGGCT
CTGTATCGCA ACCTGGCGGC ACGTGGGCTC GTCCGTCAGG GCTGA
 
Protein sequence
MTAIANHLPH DLEHATLVGR VWRTTEKSKG PSVVVVRNGV VFDITEAVPT VADLFEHPDA 
LAVARQAQGE NLGRVETLVE RSLAADRAGN APTLLAPNDL QPIKACGVTF AVSLIERVIE
EQAGGDPAKA RDVRASIAGV VGSDLSKIKP GSDAAMRLKD ELQRRGAWSQ YMEVGIGPDA
EVFSKSQPMS AVGFGADVGL HPASRWNNPE PEIVLAVSST GHVVGAALGN DVNLRDIEGR
SALLLGKCKD NNGSCAIGPF VRLFDERFTL DTIRATQVSL RVDGADDGFV LDGVSHMSEI
SRDPLDLVAQ TCGPHHQYPD GFMLFLGTMF SPIKDRDAPG AGFTHHLGDR VTISAPPLGA
LVNTVRLSTE IAPWTFGVRA LYRNLAARGL VRQG