Gene Rpic12D_4174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4174 
Symbol 
ID8021862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp777179 
End bp778135 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID644832954 
ProductABC transporter related 
Protein accessionYP_002984094 
Protein GI241665735 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACAGATC CCCTTCACGT TGACGAGACT GCCGCCATCT CGCTGCGCGG CGTCTGTAAA 
CACTATGGTG CCGTGCGAGC CGTCGACGGC GTTGACCTGG ACGTCGGCTA CGGCGAACTG
TTCGGCCTGA TCGGGCACAA CGGTGCCGGC AAGAGCACGC TGTTCAAGAT GATGCTTGGG
CTGATTCCGG CAACCGCCGG CAGCATCCGC GTGGCCGGGG CATCGGTGCG TGGGGCTGCA
TTCCGCGCCG CGCGCAGGCA GATCGGCTAC CTGCCCGAGA ACCTCGTTCT GTACGACAAC
CTGAGCGGGT TGGAGACCTT GCGGTTTTTC GCCAAGCTCA AGGGCGCACC GGCAGCCGAT
TGCGCGTCGC TGCTTGCCCG CGTCGGGCTG GCGGGTGCGG TCGACCAACC CGTGCGGGCG
TATTCAAAGG GGATGCGGCA GCGCCTCGGG TTTGCGCAGG CGCTGTTGGG TGCGCCACGC
GTGCTTTTTC TGGATGAGCC GACCAACGGC CTCGATCCGG CGGCAATCCA CGACTTCTAC
GCCACGCTGC AGGCACTGCG CGAGCAGGGC GTCACGATCC TGATCACGTC GCACATCCTG
GCCGAGCTGC AGCAGCGCAT CGACCGCCTT GCCATCCTGG CCGACGGCCG TGTCCTTGCG
CTTGGCAGTG TCGCTGCACT GCGCGCACAG GCCGATCTGC CCCTGACGCT GGCCTTGCGG
GTCGAGGCCG GCGCGCGCGG CGCACTGTGG GCGCAACTCG CGCCCTTGCG CGCACACGGC
GCAGAGATCG TCGACGGGCA GGCCGAGCAT GAGGTGATGC TGCGCTGCAG CCGCTCGCTC
AAGATGGACG TACTTCAGGC ACTGCAGCCG CTGGGCGGGC GCCTGCTCGA TCTGCAGATC
CACGAACCGT CGCTCGAAGA CGTGTTCTTT GGCCTCAGGC AAACGGAGGC CGCATGA
 
Protein sequence
MTDPLHVDET AAISLRGVCK HYGAVRAVDG VDLDVGYGEL FGLIGHNGAG KSTLFKMMLG 
LIPATAGSIR VAGASVRGAA FRAARRQIGY LPENLVLYDN LSGLETLRFF AKLKGAPAAD
CASLLARVGL AGAVDQPVRA YSKGMRQRLG FAQALLGAPR VLFLDEPTNG LDPAAIHDFY
ATLQALREQG VTILITSHIL AELQQRIDRL AILADGRVLA LGSVAALRAQ ADLPLTLALR
VEAGARGALW AQLAPLRAHG AEIVDGQAEH EVMLRCSRSL KMDVLQALQP LGGRLLDLQI
HEPSLEDVFF GLRQTEAA