Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4126 |
Symbol | |
ID | 8021814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 725058 |
End bp | 727334 |
Gene Length | 2277 bp |
Protein Length | 758 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644832907 |
Product | nitric oxide reductase subunit B |
Protein accession | YP_002984047 |
Protein GI | 241665688 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3256] Nitric oxide reductase large subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCA ATCAAAGGCT GTGGCGGTGG CTCGGCCTGA TCTTCATCCT GTCGTTCGGA GCATTGGGCT ATCTGGGCCG GCAGATCTAT CTGGCAGCGC CGCCGATTCC GCATGCCGTC GTCACCTCTG TGGGCGAGGT GCTCTTTACC GGTGAGCAGA TCCAGCGCGG CCAGGAAGCT TGGCTGGCAG CCGGCGGCCA GCAGCTTGGC ACCGTCTGGG GCCACGGCAG CTACGTTGCA CCTGACTGGT CTGCCGATTG GCTGCACCGT GAAGCCACAG CGCTGCAAGC CATCCGCGCG CATCAGCAGT TCGATACCGA TGCGCCGTTG ACGACCGTGC AGCAAGCCGC CGTCGACGCC AGCGTGAAGG AGGAAATGCG CCGCAATACG TACGACGCAA ATCACGACAT CCTGACCGTG TCGCGTGAGC GCGCAGAGGC CATCCACGGT GTGGCCCAGC ACTTCGAGGC CCTGTTCGGC ACCGATCCGT CGCTGGCAAC GCTGCGCGAT CAATACGCCA TGGCCACCGG CGTGCTGCCG GAGGCGGCCG ATCGTGAAGC CCTGGCGGCG TTCTTCTTCT GGACGTCGTG GGCCGCGGCC GCCGACCGCC CAGGCGAGAC CGACATCTCG TATACGAGCA ACTGGCCGCA TGAACCGCTG GTAGGCAACA CAATGACCGG CGGTGCGGCA GTGTGGTCGA TGGTCAGCAT CGTGCTGCTG CTGGGCGGTA TTGCCGCCAT GCTGTGGCTG CACGGCAGCA GCAAGCACGA AGAGGAGGCT GCGCCGCTGC CGGCCGATCC GTTCCTCAAC GTGGTGGCCA CGCCGTCGAT GAAGGCCACG CGCAAGTACT TCTTTGCCGT GATCGGCCTG ATGCTGGTGC AGATCGGCAT GGGCGCCATC ACCGCGCACT ATGCGGTGGA AGGGGAATCG TTCTTCGGGA TTCCGCTGGC GCAGGTGCTG CCGTACGTGA TCAGCCGCAC CGTGCACACG CAGCTTGGCG TGCTGTGGAT TGCCACGGCA TGGCTGGCCA CGGGCCTGTA CATTGCGCCG CTGCTGTCGG GGCGTGAACC GAAGTTCCAG AAGCTGGGCG TTGACCTGCT GTTCTGGGCG CTGATCTTTA TCGTGGTGGG GTCCATCGCC ACCGGCTGGC TCGGCACGCT GCAACATCGC GGTGCAGACT TCGGCTTCTG GGTCGGTAAC CAGGGGCTGG AATACACCAG CATGGGCCGC GTGTGGCAAA TCTTGCTGTT TGTCGGCCTG CTGTTCTGGG TCGTGCTGCT GGGCCGTGCC CTGTGGCCGG CACTGAAGAC GCCGTCGGAA TCGCGCGGTC TGATCGCCAT GGTGTTCCTG TCGGCCACCT GCATCGGCGG GTTCTATTCG ACTTCGCTGG TGTGGGGCCA ACACACGCAC TATTCGATGA TCGAGTACTG GCGCTGGTGG CTCGTCCACC TGTGGGTCGA GGGCTTCTTT GAAGTGTTCG CCACCGCGGT CATCGCGCTC ATCTTCACGC GCCTGGGCCT GATTCGCGCC AGCAGCGCCA ACCGCGCCAT CGTGGCCGAG ACGATCGTGT TCCTGTTCGG CGGCATTCTG GGCACGCTGC ATCACCTGTA CTTCACAGGG ACACCGACCT CGATCATCTC GGTGGGTGCA GTGTTCTCTG CGCTGGAAGT GGTGCCGCTT TCGCTGATCG GGCTCGAAGC GCTGCAGAAC TATCGGCGCA CGCAAGGCAC GCCATGGCTC AACGCTTACA AGTGGCCCGT GCTGTGCTTC GTGGCCGTGG GCTTCTGGAA CACCGTCGGC GCCGGCCTGC TCGGCTTTGC CATCAACCCG CCCGCTTCGC TGTACTACGT GCAAGGTCTG AACATGACGG CCGCCCACGG GCACGCTGCA CTGTTCGGGG TGTACGGCAT GCTCGGTATC GGCCTGATGC TGTTCTGCCT GCGCGGCCTG TATGCGCGCA GCCTGCATGC CGATCGCCTG CTCAAGCCCG CGTTCTGGGG CCTGAACATC GGCTTGGCGA TGATGGTATT CATGTCGCTG CTGCCGGCCG GCATCTATCA GGCCTGGGCG AGTGTCACCA AGGGCATGTG GTACGCCCGC TCGCCGGAAG TGGTGCACTC GAAAGTGATG GAAACGCTGG TCTGGCTGCG TGTGCCGGGT GACATCGTGT TCGCCATCGG TGCGCTTGTG CTGGCCTGGT ATGCGCTGCG GCTGCTGCGC CGTCCGAAGG CCCAACAGAT GGAGCCATTG CCGGCTTCGG CTCGCGCGAC GCGTTAA
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Protein sequence | MKTNQRLWRW LGLIFILSFG ALGYLGRQIY LAAPPIPHAV VTSVGEVLFT GEQIQRGQEA WLAAGGQQLG TVWGHGSYVA PDWSADWLHR EATALQAIRA HQQFDTDAPL TTVQQAAVDA SVKEEMRRNT YDANHDILTV SRERAEAIHG VAQHFEALFG TDPSLATLRD QYAMATGVLP EAADREALAA FFFWTSWAAA ADRPGETDIS YTSNWPHEPL VGNTMTGGAA VWSMVSIVLL LGGIAAMLWL HGSSKHEEEA APLPADPFLN VVATPSMKAT RKYFFAVIGL MLVQIGMGAI TAHYAVEGES FFGIPLAQVL PYVISRTVHT QLGVLWIATA WLATGLYIAP LLSGREPKFQ KLGVDLLFWA LIFIVVGSIA TGWLGTLQHR GADFGFWVGN QGLEYTSMGR VWQILLFVGL LFWVVLLGRA LWPALKTPSE SRGLIAMVFL SATCIGGFYS TSLVWGQHTH YSMIEYWRWW LVHLWVEGFF EVFATAVIAL IFTRLGLIRA SSANRAIVAE TIVFLFGGIL GTLHHLYFTG TPTSIISVGA VFSALEVVPL SLIGLEALQN YRRTQGTPWL NAYKWPVLCF VAVGFWNTVG AGLLGFAINP PASLYYVQGL NMTAAHGHAA LFGVYGMLGI GLMLFCLRGL YARSLHADRL LKPAFWGLNI GLAMMVFMSL LPAGIYQAWA SVTKGMWYAR SPEVVHSKVM ETLVWLRVPG DIVFAIGALV LAWYALRLLR RPKAQQMEPL PASARATR
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