Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4095 |
Symbol | |
ID | 8021783 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012857 |
Strand | - |
Start bp | 692602 |
End bp | 693312 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644832876 |
Product | transcriptional regulator, IclR family |
Protein accession | YP_002984016 |
Protein GI | 241665657 |
COG category | [K] Transcription |
COG ID | [COG1414] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.267726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.126686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGAATG ACGGCGTTGC CGCAGTAGAA AAGGCGCTGG CCTTGCTGGA TTGCTTCAAG CCGGGGGCGG AAGCCTTGTC GCTCGCAGCC TTGGCGCAAG CCTCGGGCAT GCACAAGACC ACGGTGTATC GGCTGATGAA CTCGCTGGAG CGCATGAGCT ATGTCATCCG CTCCGAGTCC GGCGCGTACT CGCTCGGGCC ACGCCTGCTG TATCTCGGCA AGCTCTACGA GCAGTCGTTC CACTTGTCTT CCGTGGTGGA ACCGGTGCTG CACGCGCTGG CGGCCGCCAC GCGAGAGAGC GCATCGTACT ACGTCGTCGA TCACGGCCGG CGGCTGTGCC TGTTCCGCGC CGAGCCCTCG GAAGGCCTGC GTGAGACGCG GCTGCCCGGC ACGTCGCTGC CGCTGGACGA CACGGCCATC AGCCACGTGC TGCGTTACTG GGGGCTGGGT GAAGCGCTGT ATGACGAAAC ACCCAAGCTG CCGCTGTTCA CCTCGGGCGC GCGGGACCAG CACACGGCGG CGTTTGCCAC GCCCATCTTC GGTTCCGGCG ACAAGTTCAT GGCTGCGCTG ACGCTGTCGG GCGCAGCCTC CCGGCTGGAA GCGGCACGCA CCTCTGGGGA TGTCGTCGCG AAGCAGTTGC AGGCGGCGTC CGACCTGTCG CGCAAACTCG GCGCAAGTGC GGCGTTGTGC GAACGCTTCT ACGGTGTTTG A
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Protein sequence | MGNDGVAAVE KALALLDCFK PGAEALSLAA LAQASGMHKT TVYRLMNSLE RMSYVIRSES GAYSLGPRLL YLGKLYEQSF HLSSVVEPVL HALAAATRES ASYYVVDHGR RLCLFRAEPS EGLRETRLPG TSLPLDDTAI SHVLRYWGLG EALYDETPKL PLFTSGARDQ HTAAFATPIF GSGDKFMAAL TLSGAASRLE AARTSGDVVA KQLQAASDLS RKLGASAALC ERFYGV
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