Gene Rpic12D_4035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4035 
Symbol 
ID8021723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp609471 
End bp610388 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content68% 
IMG OID644832817 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002983957 
Protein GI241665598 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.176512 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCTC ATCGCCTGCA GGAGACGTCC CTCCGCTATT TTCTGGAGGT TGTGCGCAGC 
GGTTCATTGA CGGAGGCGGC CGCGCGCCTG CACGTCAGCG CGTCCGCCAT CAGCCGGCAA
GTGGCGATGC TTGAAGAGCT GCTGGGCGTG CCGCTGTTCG AGCGGCAATC GCGTGGCATG
CGGCCCAGCG CAGCAGGCGA GCTGCTTGCC GCGCACGCGC TGCGCGGGGC GCTGGAGGCA
GAGCGCGTGG TCTCGGATAT TCAGGGCCTG CAAGGGCTGC AGCGCGGCCG TGTGCGCATT
GCGTGCTCCG ATGGCTTTGC GATCGAGTTT GTGCCGCGCG CCATCGTGGC GTTTCGCGAG
CGGCATCCCG GCATTCAGTT CGACCTGCGC GCCGAAGAGC CCATGCGCGT GACCGAGGCC
GTCTTGCGTG GCGACGTGGA CATCGGCCTG ACCTACAGCC GCGCCGCCGT GCACGGCATT
CGCGTGGCGT ATCAGCAGCG TGGCTCAGTG TTTGCCATCA TGCGGCCCGA CCACCCGCTG
GCGAAGTTCA ACAGCGTGAC GCTGGCGCAG ATGCACCCGT TTCCGATTGC GCTTTCGGGG
CCGGACAACA CGGTGCGCCA ATTGTTCGAC ATGGGCTGCA GTCAGCGCGG GCTCGTGTTC
GAGCCGGTGC TGGTCAGCAA CCGCTTCGAT GGGCTGTTGA GTTTCGTGCT GCAAGGCGGC
GGCTTGGGCA TCGCGGGGGA GATCACGGTG CGCGAGCGCG TGCAGCGCGG TGAGCTGCAT
GCCGCGGAGA TCCGCGAGCG CGGCATGCGC GGGCGGACGG TAGAACTGCA GATCCTGGCG
GGGCGCACCT TGCCCGAGGT GGTGCGGGTG TTTCTGGACT TCCTGCGCGA GGCGCTGCCG
GAGCAGCCCC CGCGCTAA
 
Protein sequence
MSSHRLQETS LRYFLEVVRS GSLTEAAARL HVSASAISRQ VAMLEELLGV PLFERQSRGM 
RPSAAGELLA AHALRGALEA ERVVSDIQGL QGLQRGRVRI ACSDGFAIEF VPRAIVAFRE
RHPGIQFDLR AEEPMRVTEA VLRGDVDIGL TYSRAAVHGI RVAYQQRGSV FAIMRPDHPL
AKFNSVTLAQ MHPFPIALSG PDNTVRQLFD MGCSQRGLVF EPVLVSNRFD GLLSFVLQGG
GLGIAGEITV RERVQRGELH AAEIRERGMR GRTVELQILA GRTLPEVVRV FLDFLREALP
EQPPR