Gene Rpic12D_3947 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3947 
Symbol 
ID8021635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp525548 
End bp526408 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID644832736 
Productenoyl-CoA hydratase 
Protein accessionYP_002983876 
Protein GI241665517 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0950827 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACC CGAATCACCA TGTGGACCCG GCCCTGCTGG CCGGCAACCG CCGACCGCTG 
GCGGGCTATC AAGCCAAGCA TTTCCTGTGG AGCGTCGAAG GCGGCGTTGC CACCATCACG
CTCAACCGGC CCGAGCGCAA GAACCCGCTC ACGTTCGATT CGTATGCCGA GCTGCGCGAC
CTGTTTCATC AGCTCAAGTG GGCGGATGAC GTCAAGGCCA TCGTGCTGGC CGGTGCGAGC
GACAACTTCT GCTCCGGCGG CGACGTGCAC GAGATCATCG GCCCGCTCGT GCAACTGAAG
GCGCCCGAGC TGCTGATGTT CACGCGCATG ACGGGCGAAC TGGTGAAGGC GATGCGCGCG
TGCCCGCAGC CCATCGTCGC TGCCATTGAC GGCGTGTGCG CGGGCGCGGG CGCCATCCTG
GCGATGTCTT CCGACCTGCG CCTGGGCACG GCGCGCAGCA AGACGGCGTT CCTCTTCAAC
CGCGTCGGCC TGGCCGGCTG CGACATGGGC GCCTGCGCGA TCCTGCCGCG CATCATCGGT
CAGGGCCGCG CGAGCGAACT GCTCTACACG GGGCGTTCGA TGAACGGCGA AGAGGGCGAG
CGCTGGGGCT TCTTCAACCG CCTGTGCGAA CCGGCCCAGG TGCTGAGCCA AGCGCAAGCC
CTGGCCGCCG ACCTGGCCGC CGGCCCGACC TTCGCCAACG GCATTACCAA GACGATGCTG
CACCAGGAAT GGACGATGAC GATCGAGCAG GCCATCGAGG CCGAGGCGCA GGCACAGGCC
ATCTGCATGC TGACCGAAGA TTTCTCGCGG GCGTATCACG CGTTTGTCGC CAAGCAGAAA
CCGGTATTCG AGGGGAACTG A
 
Protein sequence
MTDPNHHVDP ALLAGNRRPL AGYQAKHFLW SVEGGVATIT LNRPERKNPL TFDSYAELRD 
LFHQLKWADD VKAIVLAGAS DNFCSGGDVH EIIGPLVQLK APELLMFTRM TGELVKAMRA
CPQPIVAAID GVCAGAGAIL AMSSDLRLGT ARSKTAFLFN RVGLAGCDMG ACAILPRIIG
QGRASELLYT GRSMNGEEGE RWGFFNRLCE PAQVLSQAQA LAADLAAGPT FANGITKTML
HQEWTMTIEQ AIEAEAQAQA ICMLTEDFSR AYHAFVAKQK PVFEGN