| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3819 |
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| Symbol | |
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| ID | 8021506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 386379 |
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| End bp | 389585 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832609 |
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| Product | acriflavin resistance protein |
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| Protein accession | YP_002983750 |
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| Protein GI | 241665391 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.847206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGGATTG TCCAACTCGC GCTGCGAAGG CCGCTGACGT TCATCGTCCT CGCCCTGCTG
ATCCTGCTGG CGACGCCGTT TACGCTCATG CGTACGCCCA CGGACATCTT TCCGGAAATC
GACATTCCGG TCGTCAGCAT CATCTGGAAT TACAACGGCC TGCCCGCCAA GGAGATGGCC
GACCGCATCG TGTCAGTCAC GGAGCGCAGC CTGACGACCA CCGTCAACGA CATCGAGCAC
ATCGAGTCGC AATCGTTGAA CGGCATCTCG ATCGTCAAGG TGTTCTTCCA GCCGACGGCC
AACATCCAGA CCGCGCTGGC GCAGATCGTT TCGGTGTCGC AGGCGCAGGT GCGTCAGTTG
CCACCGGGGA CGACGCCGCC GCTGATCATC AAGTATTCGG CGTCGAGCAT TCCGATCCTG
CAGTTGGGCC TGTCGAGCAA CACGCTGTCG GAGCAGGAAC TCAATGATGC GGCGCTGAAC
TTCCTGCGCC CGCGCCTGAT CACGGTGCCC GGCATCGCCG TGCCGTTCCC GTATGGCGGC
AAGAGCCGGC AGATCACGGT CGATCTCGAC ACGCAGAAGC TGCTGGCGCA GGGCCTGACC
CCCGTGGACA TCGTCAACGC GGTGGGCGCA CAGAACCTGA TCCTGCCGGC CGGTACGCAA
AAGATCGACG CCACCGAATA CGGCGTCACG CTCAATGGCA CGCCGGGCAG CATCGCCGCA
CTCAACGCCA TTCCGGTCAA GACCAGCAAC GGCGCCACGC TGTACCTGGG CGACGTGGCC
CATGTGCGCG ACGGTTTCTC GCCGCAGACC AACGTGGTGC GCCAGGACGG CCAGCGCGGC
GTGCTGCTGT CCATCCTGAA GAACGGCGGT GCGTCGACGC TGGATATCGT CAGCAACATC
TACAAGCTGC TACCCACCGC CGCGGCGGCG CTTCCGCAAG ACATCAAGAT CACGCCGCTG
TTCGATCAGT CGCTGTTCGT GAAGGCGGCC ATCGAAGGGG TCATCCGCGA GGCGCTGATC
GCCGCGTGCC TGACGGCCGC CATGATCCTG CTGTTCCTCG GCAACTGGCG CAGCACGGCC
ATCATTGCCG TGTCGATTCC GCTGTCGATC CTGTCGTCGA TCATCGTGCT GCATCTGCTG
GGCGAAACCA TCAACCTGAT GACGCTCGGC GGCTTGGCGC TCGCGGTGGG GATCCTGGTG
GACGATGCCA CCGTCACCAT CGAGAACATC GAGCGCCATC TGCACGAGGG CAAGGAGCCC
GTCACCGCCA TCCTGGACGG CGCGGCCGAG ATTGCCGTGC CGGCCTTCGT GTCGACCCTG
TGTATCTGCA TCGTGTTCGT GCCGATGTTC TTCCTCACGG GCGTGGCGCG TTACCTGTTC
GTGCCAATGG CCGAAGCGGT GATCTTCGCC ATGCTGGCGT CGTATGTGCT GTCGCGCACG
CTGGTGCCGA CGCTGGTGAT GATGCTCATG ACCGGCCGCA CGCAAAACGC CACGAAAGCC
GACGCAAAAC CAGGCACATT CGGCCGCATC TACCGGGCGT TCAACACGCA GTTCGAGCAC
ATGCGCGGCA ACTACGCCGC CATCCTGGGC GGGTTGCTGG AGCGTCGCCG CGTGTTCGCA
CTGTCGTTCC TGGGCTTCTG CGTGGCGTCG TGCGCGCTGT TCCTGGTGCT CGGCCGCGAT
TTCTTCCCCG ATGTGGATGC GGGCCAGATC CGACTGCATA TGCGGGCACC GTCGGGCATG
CGCATCGAAG AAACCGCACG CCTGGCCGAC GAGGTCGAAA CCGCCATCCG CGAAATCATT
CCGAAAAAGG AACTGTCGAC GATTCTCGAC AACCTGGGCG TGCCGAACTC CGGGATCAAC
CTGTCGTACA GCAACGCCGG CACCATCGGC ACGCTCGACG GCGAAATCCT GATCGCGCTA
CAGGAAGGCG AGCGCAAGCC CAGCGCTCAG TACGTCCGCC GCCTGCGAGA AGAACTGCCC
AAGCGCTTCC CGGGCGTGGA GTTCGCCTTC CAGCCTGCGG ACATCGTCAG CCAGATCCTG
AACTTCGGCC TGCCATCGGC CATCGACGTG CAGTTCTCGG GCGCCGACGT GGCCACCAAC
AAGCAGCTCG CGGGCATGCT GGCCAACCGC ATCAAGCAGA TTCCGGGGGC AGTCGATACA
CACGTGCACC AGCGCTTCGA CCAGCCCACG CTGGCCCTGA ACATGGACCG CACCCGCATC
CAGCAGGTGG GCCTCGAAGG GCGCGACGTG GCGCAGAACC TGCTGGTCTC GCTCAGCTCG
AGCTTCCAGA CCTCGCCCAC GTTCTGGCTC AACCCGATCA ACGGCGTGGT GTACCAGGTG
GCCGTCACCA GCCCGCAGTA CCGCATCGAC TCGCTCGACG CACTGCTGCG AACGCCGGTG
GCCAGCTCGC GCGGTGGCGC CGCACAGGCA GGCGGCCCGC AACTGCTGGG TAACCTCGTG
CAGGTGAGCC CTGCCGTGCA GCCGCAGGTC GTCTCGCATT TCAACATCAC CCCCGTGGTG
GACGTGTACG CCGCCGTGCA GGGCCGCGAC CTGGGCGCCG TCGCCAAGGA AGTGCAGAAG
GCCGTCGATG ACATCCGCCC CAAGCTGCCG CGCGGCGCGC AGGTCACGGT GCGCGGTCAG
GTGAAGACGA TGGAATCGTC CTTCATCGGC CTGGGTGTGG GGCTGGTGAT GGCGATCGTG
CTGGTGTACC TGCTGATCGT CGTGAACTTC CAGTCGTGGA TCGACCCGCT CATCATCGTG
ACCGCCCTGC CGGCCGCGCT GGCGGGCATC GCCTGGATGC TGTTCGTGAC GGGGACCACG
CTGTCGGTGC CATCGCTCAC AGGCGCGATC ATGACGATGG GCGTGGCGAC GGCCAACTCG
ATTCTGTTGA TCTCGTTTGC GCGTGAGCGA TTGGCCGAAG GCATTGCGCC TGTGCAGGCC
GCGCTGGAAG CGGGTGCCAC CCGCCTGCGC CCGGTGCTGA TGACGGCCCT GGCGATGATC
ATCGGCATGG TGCCCATGGC GTTGGGCCTG GGCGAAGGCG CAGAACAGAA CGCGCCGCTG
GGGCGCGCGG TGATCGGCGG TCTGCTGTTT GCGACCGTGT CGACCCTCTT CTTTGTTCCG
GTGGTGTTTG CCAGCGTACA CAACAGATTG CAGCGGCGCG CCGCCCGGCG TAGTCACGAT
TTGCGGGGAA GCGAAGGACA TGTCTGA
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| Protein sequence | MWIVQLALRR PLTFIVLALL ILLATPFTLM RTPTDIFPEI DIPVVSIIWN YNGLPAKEMA
DRIVSVTERS LTTTVNDIEH IESQSLNGIS IVKVFFQPTA NIQTALAQIV SVSQAQVRQL
PPGTTPPLII KYSASSIPIL QLGLSSNTLS EQELNDAALN FLRPRLITVP GIAVPFPYGG
KSRQITVDLD TQKLLAQGLT PVDIVNAVGA QNLILPAGTQ KIDATEYGVT LNGTPGSIAA
LNAIPVKTSN GATLYLGDVA HVRDGFSPQT NVVRQDGQRG VLLSILKNGG ASTLDIVSNI
YKLLPTAAAA LPQDIKITPL FDQSLFVKAA IEGVIREALI AACLTAAMIL LFLGNWRSTA
IIAVSIPLSI LSSIIVLHLL GETINLMTLG GLALAVGILV DDATVTIENI ERHLHEGKEP
VTAILDGAAE IAVPAFVSTL CICIVFVPMF FLTGVARYLF VPMAEAVIFA MLASYVLSRT
LVPTLVMMLM TGRTQNATKA DAKPGTFGRI YRAFNTQFEH MRGNYAAILG GLLERRRVFA
LSFLGFCVAS CALFLVLGRD FFPDVDAGQI RLHMRAPSGM RIEETARLAD EVETAIREII
PKKELSTILD NLGVPNSGIN LSYSNAGTIG TLDGEILIAL QEGERKPSAQ YVRRLREELP
KRFPGVEFAF QPADIVSQIL NFGLPSAIDV QFSGADVATN KQLAGMLANR IKQIPGAVDT
HVHQRFDQPT LALNMDRTRI QQVGLEGRDV AQNLLVSLSS SFQTSPTFWL NPINGVVYQV
AVTSPQYRID SLDALLRTPV ASSRGGAAQA GGPQLLGNLV QVSPAVQPQV VSHFNITPVV
DVYAAVQGRD LGAVAKEVQK AVDDIRPKLP RGAQVTVRGQ VKTMESSFIG LGVGLVMAIV
LVYLLIVVNF QSWIDPLIIV TALPAALAGI AWMLFVTGTT LSVPSLTGAI MTMGVATANS
ILLISFARER LAEGIAPVQA ALEAGATRLR PVLMTALAMI IGMVPMALGL GEGAEQNAPL
GRAVIGGLLF ATVSTLFFVP VVFASVHNRL QRRAARRSHD LRGSEGHV
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