| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3789 |
|---|
| Symbol | |
|---|
| ID | 8021476 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | - |
|---|
| Start bp | 355056 |
|---|
| End bp | 355760 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 644832579 |
|---|
| Product | 6-phosphogluconolactonase |
|---|
| Protein accession | YP_002983720 |
|---|
| Protein GI | 241665361 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
|---|
| TIGRFAM ID | [TIGR01198] 6-phosphogluconolactonase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGC GCTGGCATGC CCTGGCGGAC CCGGCAGGGC AGGCGAAGGC GCTGGCCGAG
GCCATCGCCA GCACCCTCAC GCACGTGATC AATGAGCAGG GCCGGGCGTG CCTGGCCGTG
TCGGGCGGCC GCTCCCCCAT TGCGCTGTTT GCCGCGCTGC GCGTGCAGCC GCTGCGCTGG
GCCGACGTCG CGGTCACGCT CGTCGACGAG CGCGCCGTGC CGCCCGAGCA TGCGGACAGC
AATGCGCGGC TGGTGCACGA GCATCTGCTG AAGGACGCCG CCGCCGCGGC GCGGTTCTTC
CCGCTGGTCT TGCCAACGCA TGTGCATGGA GGTTCGGTGG ACGTGGATGC TTGTGTGGCC
ACGGCCAACG ATCCGTTCCA GCAGCCAGAC GTGGTCGTTC TCGGCATGGG CGACGATGGG
CATACGGCCT CGCTGTTTCC GGACGCGCCC GAACTGGCCG ACGGCTTGGA TCGCGCGCGC
GCGCCAGCCT ATCTGCCGGT GCGCCCGCCA GCGGCGCCGC ACCGGCGCAT CAGCCTGAAC
CTGTCGGCGC TGTGCGCTGC GCGGCGGTTG TTCCTGTCGA TTTCGGGGCC GGTCAAGCGC
ACGGTGTTCG ACACCGCGAC GCAAGGCGGC ACGCAGCCTG CGCTGCCGGT CAGTTATGTC
ATCCATCAGC GGGAGGTACC GCTCGATGTC TATTGGACTG CATGA
|
|---|
| Protein sequence | MTTRWHALAD PAGQAKALAE AIASTLTHVI NEQGRACLAV SGGRSPIALF AALRVQPLRW
ADVAVTLVDE RAVPPEHADS NARLVHEHLL KDAAAAARFF PLVLPTHVHG GSVDVDACVA
TANDPFQQPD VVVLGMGDDG HTASLFPDAP ELADGLDRAR APAYLPVRPP AAPHRRISLN
LSALCAARRL FLSISGPVKR TVFDTATQGG TQPALPVSYV IHQREVPLDV YWTA
|
|---|
| |