| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3718 |
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| Symbol | |
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| ID | 8021405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | + |
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| Start bp | 272659 |
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| End bp | 273354 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644832508 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_002983649 |
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| Protein GI | 241665290 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0262455 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.571903 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAAATCAA TCGTAGTCGA GGCCCACCCT TTGGTGCGTG CTGGCGCAAC CCATGTTTTG
CAGTCCCTGC CGGCCATTTC CGAGGTCGTC AGTGTCGAGC CGGACGAGAC CCTCTTCGAA
AATCTGGCGG CGCATGGGGA CGCCGAACTG GCGCTGGTCG GCCTGCCCAT ACCGGGTATC
GACGATGTGC CGGCCCTTTC CCGACTGCTG CAACAGCCGC ACCCGAGGCA TATCGCCGTG
CTGGGTGAAA CGGACTCCGC CGCGCATGTG CGCGCGCTCA TGCAGTTGAA TGTTTCAGCG
TATCTGCTGA AAAGCTATTC CGGCAAATTG ATCGCAGCGG CATTGGAACT GGTATTGGCA
GGCGGGCGTT ATGTGCCGGC CTCCGTCGTG CTCGCCCGGC CAGAGGCCAT TGCCGCGGCA
TCGCCCGGCG GGAACAACGA TTGCGCAATG CTCGGACTCA CCCAGCGCCA ATACGAGATC
CTGGTATTGC TCTCACGCGG ACACCCCGTC AAAACCATCA GCCGCATGCT CGGCATTTCG
GAAGCGACGG CCAAGGCGCA TATCAACGCG CTCTATCGCC GGCTGGAAGT CCGCAGCCGC
ACCGAGGCCG TATTCGTCGC CACGCAGCGC GGCGCGATGC TGTTGAATCA CCCGCAGCTG
GCCGAGCCGC CTCTGCGCCT GGCGCGTACC GGCTGA
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| Protein sequence | MKSIVVEAHP LVRAGATHVL QSLPAISEVV SVEPDETLFE NLAAHGDAEL ALVGLPIPGI
DDVPALSRLL QQPHPRHIAV LGETDSAAHV RALMQLNVSA YLLKSYSGKL IAAALELVLA
GGRYVPASVV LARPEAIAAA SPGGNNDCAM LGLTQRQYEI LVLLSRGHPV KTISRMLGIS
EATAKAHINA LYRRLEVRSR TEAVFVATQR GAMLLNHPQL AEPPLRLART G
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