Gene Rpic12D_3709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3709 
Symbol 
ID8021396 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp265380 
End bp266162 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content64% 
IMG OID644832499 
Productflagellar basal-body rod protein FlgG 
Protein accessionYP_002983640 
Protein GI241665281 
COG category[N] Cell motility 
COG ID[COG4786] Flagellar basal body rod protein 
TIGRFAM ID[TIGR01396] flagellar basal-body rod protein FlgB
[TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.409593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGCT CCCTGTGGAT TTCCAAGACC GGGATGGACG CCCAGCAATC GCAGCTGGAT 
GTCATCTCGA ACAACCTGGC GAACGTCAAC ACGACCGGCT TCAAGCGCTC GCGCGCCGTG
TTCGAAGACC TGCTGTATCA GAACGTGCGC GAGCCGGGTG CGCAGTCGTC GCAGCAGACG
ACGCTGCCCT CGGGCATGCA GATCGGTACC GGCGTGCGCA TCGTGGCCAC CGAGCGCCTG
CACACCCAGG GCAACCTGCA GCAGACCGGC AATGCGACCG ACGTGGCCAT CAACGGCAAC
GGGTTCTTCC AGGTGCAGAT GCCTGACGGC ACGCTGGCCT ACACGCGTGA CGGCAGCTTC
CAGGTCAACG CCCAGGGTCA GCTGGTGACG TCCAGCGGCT ACCCGATCCA ACCGGCCATC
ACCGTGCCGC AGAACGCCAC GAGCTTCTCG GTCGGCAAGG ACGGTGTGGT GACGGTGACC
ACGCCGGGCT CGGTCAACAA CACGCAGGTG GGCACGTTCC AGCTGGCCAA CTTCATCAAC
CCGGCCGGCC TGCGCAGCAT GGGCGAGAAC CTGTATGCCG AGACCGAAGC GTCCGGCACG
GCCAACCTGG CCAACCCGGG ATCGAACGGC GTGGGCGTGC TCAACCAGAA CTACGTGGAA
ACGTCCAACG TGAACGTGGT GGAAGAGATG GTCAACATGA TCCAGACGCA GCGCGCGTAC
GAGATCAACA GCAAGTCGGT GCAGACCTCC GACCAGATGC TGGAGAAGCT GTCGCAGCTC
TAA
 
Protein sequence
MIRSLWISKT GMDAQQSQLD VISNNLANVN TTGFKRSRAV FEDLLYQNVR EPGAQSSQQT 
TLPSGMQIGT GVRIVATERL HTQGNLQQTG NATDVAINGN GFFQVQMPDG TLAYTRDGSF
QVNAQGQLVT SSGYPIQPAI TVPQNATSFS VGKDGVVTVT TPGSVNNTQV GTFQLANFIN
PAGLRSMGEN LYAETEASGT ANLANPGSNG VGVLNQNYVE TSNVNVVEEM VNMIQTQRAY
EINSKSVQTS DQMLEKLSQL