Gene Rpic12D_3697 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3697 
Symbol 
ID8021384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp252807 
End bp254033 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content67% 
IMG OID644832487 
Product3-oxoacyl-(acyl carrier protein) synthase II 
Protein accessionYP_002983628 
Protein GI241665269 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.750447 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGCG TCGTCATTAC AGGCATGGGC GGCGTCACGG CCCTGGGCTC TGCCTGGAGC 
GAGATCCAAT CCGCCATCGA GCAGGGCCGG AATGCCGTGC GCCGCATGCC GGAGTGGGAT
TACTTCGATA CCCTGCACGC CCGCCTGGCC TGCCCGCTGC CGGCCTTCGC GACACCGGCG
GAATACCCTC GCAAGAAGAC GCGCTCGATG GGCCCGGTGT CTGTGTACGC CGTGCGTGCG
AGCGAACTGG CGTTGGCTGA CGCCGGTCTG GCAGGCGACT CGTCCATCGC CGATGGCCGC
ATGGGCGTTG CCTACGGATC GTCATCGGGG TCGGTGCAGC CCATCCGGGC GTTCGGCAGC
ATGCTCGACA CGGGCTCGAT GCAAGGCGTC ACCTCCAACA GCTACGTGCA GATGATGCCC
CACACGACCG CCGTCAACGT CGCGCTGTTC TGGGATCTGA AAGGCCGCAT CATCCCGACC
TCGTGCGCAT GCGCCTCGGG CAGCCAGGCC ATCGGGTACG CCTACGAAGC CATTGCCACC
GGCAAACAGA CCATGATGCT GGCCGGCGGC GCAGAAGAGC TCTCGGCCCC CGCCGTCGCG
GTATTCGACA CGCTCTACGC CACCAGCACG CGCAACGACG CGCCGCACCT GACACCGCGT
CCGTTCGACA AGGCGCGCGA TGGCCTCGTG GTGGGCGAAG GCGCGGCCAC GCTGGTGCTG
GAAGACTACG ACCACGCCCG CGCGCGCGGC GCACACATCC ACGCCGAGGT GGTCGGCTTC
GGCTGCAATT CGGATGGCGC GCACATGACG CAGCCTACCG CTGCCACCAT GGGCCAGGCC
ATGCGCCTGG CACTGCAGGA CGCGGCCCTG CCGCAAGAGG CTGTCGGTTA CGTGAACGCT
CACGGCACCT CGACCGAGTT GGGCGACATC GCAGAAAGCC AGGCCACGGC CGACGTCTTC
CGCCCGACCA TGCCCATCAG CTCGCTCAAG AGCTACATCG GTCATACGCT CGGCGCGTGC
GGCGCGATCG AGGCGTGGTG GACCATCGAG ATGATGAAGC GCAACTGGTA CGCACCCACG
CTCAACCTCG AGAACGTCGA CCCGGCCTGC GCACCGCTGG ACTACATCGT CGGCAGCGCA
CGAACCCTTG AGAGCGACTA CGTGATGAGC AACAACTTCG CGTTCGGCGG CATCAATACC
TCGCTGATCT TCAAGCGCGC CGCCTGA
 
Protein sequence
MRRVVITGMG GVTALGSAWS EIQSAIEQGR NAVRRMPEWD YFDTLHARLA CPLPAFATPA 
EYPRKKTRSM GPVSVYAVRA SELALADAGL AGDSSIADGR MGVAYGSSSG SVQPIRAFGS
MLDTGSMQGV TSNSYVQMMP HTTAVNVALF WDLKGRIIPT SCACASGSQA IGYAYEAIAT
GKQTMMLAGG AEELSAPAVA VFDTLYATST RNDAPHLTPR PFDKARDGLV VGEGAATLVL
EDYDHARARG AHIHAEVVGF GCNSDGAHMT QPTAATMGQA MRLALQDAAL PQEAVGYVNA
HGTSTELGDI AESQATADVF RPTMPISSLK SYIGHTLGAC GAIEAWWTIE MMKRNWYAPT
LNLENVDPAC APLDYIVGSA RTLESDYVMS NNFAFGGINT SLIFKRAA