| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3663 |
|---|
| Symbol | |
|---|
| ID | 8021350 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012857 |
|---|
| Strand | + |
|---|
| Start bp | 222457 |
|---|
| End bp | 222972 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 644832453 |
|---|
| Product | GCN5-related N-acetyltransferase |
|---|
| Protein accession | YP_002983594 |
|---|
| Protein GI | 241665235 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.65018 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGCGC GCGGTTCACT CGTCCTTCGG GAATGGCGCG AGAGCGACAT CCCTCAACTG
CTGCCGCTGC GCAACGATGT GCCGACGCAG TTGCAGCTCA TGACCCGCCC GCGACCGAAC
TCCGCCGCGA GCGTGCGCGA CTGGCTGATC GCGAAATCGA AGCAGAGTGA CCTGGTGCTC
TTCGTCATTG CCAGCCAGGC GGATGACAGC GTGCTGGGCT ACCTGCAGCT GAACCACATC
GATGCGGTCA ACCGACACGC TTCGCTGGGC ATCTGCCTGG CGTCGTCTGC GCAAGGCAAG
GGCCACGGGC GTGCGGCGTG CGAAGCCGCG TTTGCCTACG CCAGCGAAAC GCTGTGCCTG
CGCAAGATCA CGCTGGAGGT GTTGGCCGAA AACACGCGCG CCATCGCGCT GTACGAGAAG
CTCGACTTCC GGACCATCGG CACGTTGGCT GGCCACTACT TGCAAGACAA CCGCTGGCAT
GACGTTGTCC TGATGGAACG GATGTTGTCG TCATGA
|
|---|
| Protein sequence | MIARGSLVLR EWRESDIPQL LPLRNDVPTQ LQLMTRPRPN SAASVRDWLI AKSKQSDLVL
FVIASQADDS VLGYLQLNHI DAVNRHASLG ICLASSAQGK GHGRAACEAA FAYASETLCL
RKITLEVLAE NTRAIALYEK LDFRTIGTLA GHYLQDNRWH DVVLMERMLS S
|
|---|
| |