Gene Rpic12D_3616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3616 
Symbol 
ID8021303 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp173914 
End bp175176 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content66% 
IMG OID644832407 
ProductUDP-N-acetylglucosamine 2-epimerase 
Protein accessionYP_002983548 
Protein GI241665189 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0381] UDP-N-acetylglucosamine 2-epimerase 
TIGRFAM ID[TIGR00236] UDP-N-acetylglucosamine 2-epimerase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGGGA AGATCTTGAC CGTGTTCGGC ACACGCCCGG AGGCCATCAA GATGGCGCCG 
TTGGTCAAGG CGTTGCAGGC CGAGGCAGGC TTGACATCGG CAGTGTGCGT GAGCGCTCAG
CATCGGCAGA TGCTTGATCA GGTGCTCGAG CTGTTCGGCA TCGTGCCGGA GTTCGACCTG
AACCTCATGC GGCCGGGCCA GACGCTGTCG GACATCACGT CCAGCGTGCT GGGTGGCATC
GACGGCGTGC TCGACGTGTA CCAGCCCGAC GCCGTGCTCG TGCACGGCGA TACGACCACC
ACGCTGTCAG CAAGCCTCGC CGCGTTTTAC CGGCGCATTC CGGTGGGGCA TGTCGAGGCG
GGGTTGCGCA CCGGAAACAT CTGGTCACCG TGGCCTGAAG AATTGAACCG CCGCGTGACC
GATGCCGTCA CCACGTGGCA CTTTGCACCC ACCGCCGAGT CGCGCCAGAA CCTGCTGGAC
GAGGGCGTTG ATCCCGACCA GGTCACGCTC ACCGGCAACA CCGTCATCGA TGCGTTGCTC
GCCGTCAAGG CACGGCTGGA CGACGATACC GCGCTGTCGG CCGAGATGGC GGCGCGTTAT
CCGTTTCTCG ATCCGCGGCG GCGGATGATT CTCGTCACGG GGCATCGCCG CGAGAACTTC
GGCGAGCCGT TCGAGAACTT CTGCGTGGCG CTGCGGGTGC TGGCCGCACG GCATCCGGAC
GTGCAGATCG TGTATCCGGT GCACCTGAAC CCGAATGTGC AGCAGCCTGT CAACGCCATC
CTCTCCGGTC ACGACAACGT CTACCTCATT GCGCCGCAGG ACTACCTGCC GTTTGTGTAC
CTGATGGCGC GCGCCTACCT GATCGTCACC GATTCAGGGG GCATCCAGGA AGAAGCGCCC
GCGCTCGGCA AGCCGGTGCT CGTCACGCGC GACACCACCG AGCGGCCAGA AGCCGTGGCC
TCTGGCACCG CGCGCGTGGT GGGTACCAGC ACACAGCGCA TCGTCGACGA GGCTGAGCTG
CTGCTCGGCA ACACGGCTGA ATACGAGCGG ATGGCCCACG CCCACAACCC GTATGGCGAC
GGGCAGGCGT GCCGGCGCAT CGTGGCTGCG CTGAAGACTG CCCTGGGCGC GCAACCGCAG
AGCGCAGTGC GCGGGCCACA GCTCGTTCGC AAACCGGCCA GCGAGGCCGA GATCATCCAT
CTGGAAGCGG CTCGTGCCAT TGCGCAGGGG CCGTCGTCCG TGCATCAGCG CTCACGTCGC
TAG
 
Protein sequence
MTGKILTVFG TRPEAIKMAP LVKALQAEAG LTSAVCVSAQ HRQMLDQVLE LFGIVPEFDL 
NLMRPGQTLS DITSSVLGGI DGVLDVYQPD AVLVHGDTTT TLSASLAAFY RRIPVGHVEA
GLRTGNIWSP WPEELNRRVT DAVTTWHFAP TAESRQNLLD EGVDPDQVTL TGNTVIDALL
AVKARLDDDT ALSAEMAARY PFLDPRRRMI LVTGHRRENF GEPFENFCVA LRVLAARHPD
VQIVYPVHLN PNVQQPVNAI LSGHDNVYLI APQDYLPFVY LMARAYLIVT DSGGIQEEAP
ALGKPVLVTR DTTERPEAVA SGTARVVGTS TQRIVDEAEL LLGNTAEYER MAHAHNPYGD
GQACRRIVAA LKTALGAQPQ SAVRGPQLVR KPASEAEIIH LEAARAIAQG PSSVHQRSRR