10 homologs were found in PanDaTox collection
for query gene Rpic12D_3557 on replicon NC_012857
Organism: Ralstonia pickettii 12D



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010678  Rpic_4633  Toluene-4-monooxygenase system B  100 
 
 
86 aa  177  2.9999999999999997e-44  Ralstonia pickettii 12J  Bacteria  normal  normal 
 
 
-
 
NC_012857  Rpic12D_3557  Toluene-4-monooxygenase system B  100 
 
 
86 aa  177  2.9999999999999997e-44  Ralstonia pickettii 12D  Bacteria  normal  normal 
 
 
-
 
NC_007348  Reut_B5678  toluene-4-monooxygenase system B  90.7 
 
 
86 aa  151  2.9999999999999998e-36  Ralstonia eutropha JMP134  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_3819  toluene-4-monooxygenase system B  66.27 
 
 
88 aa  108  3e-23  Dechloromonas aromatica RCB  Bacteria  normal  0.284822  normal  0.0585101 
 
 
-
 
NC_007973  Rmet_1315  toluene-4-monooxygenase system B  66.27 
 
 
88 aa  103  1e-21  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.0829956 
 
 
-
 
NC_008825  Mpe_A0815  toluene monooxygenase gamma subunit  62.65 
 
 
90 aa  99.8  1e-20  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_008825  Mpe_A2540  toluene monooxygenase gamma subunit  51.81 
 
 
84 aa  95.1  3e-19  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.3554 
 
 
-
 
NC_009717  Xaut_4858  toluene-4-monooxygenase system B  55.32 
 
 
88 aa  58.5  0.00000003  Xanthobacter autotrophicus Py2  Bacteria  normal  0.0682005  normal  0.0304131 
 
 
-
 
NC_007777  Francci3_0212  toluene-4-monooxygenase system B  38.55 
 
 
82 aa  56.2  0.0000001  Frankia sp. CcI3  Bacteria  normal  0.957076  normal  0.215345 
 
 
-
 
NC_009485  BBta_1597  toluene-4-monooxygenase system protein B  38.55 
 
 
103 aa  51.2  0.000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
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