Gene Rpic12D_3524 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3524 
Symbol 
ID8021211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012857 
Strand
Start bp69196 
End bp69924 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID644832316 
Productcytochrome c biogenesis protein transmembrane region 
Protein accessionYP_002983457 
Protein GI241665098 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0785] Cytochrome c biogenesis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.239201 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACATCG GTCTCGGCTC CTATGGCTTC GGCTTTCTGG CCGGACTTCT TTCGACGCTG 
TCACCTTGTG TCCTGCCACT TGTCCCGATC CTGCTTGGAT CAGCGACGAG CGTGCATCGG
CGGGCGCCGC TCGCGCTCGC CGGTGGCCTG GCGATTTCCT ACGCGACCAT CGGAACCTCG
CTAGCATGGG CGGGGGCGGC GTTGAACCTC GATACCGGTG TGTTTCGTTC TGTAGGCGCG
ATGGTGCTTG CGCTGCTCGG GGTTGTGCTG ATGTCGGGCA ACCTTCAACA GCGTTTCGCG
GTAGCGACTT CCGGCGTGGG CGACGCTGGT CAAAGCCTGA TATCGCGCCT CCAGCCGGAC
GGTATGTGGG GTCAGTTCAT CGTCGGCCTT GTGCTTGGGG TGGTGTGGAG TCCGTGTGTG
GGCCCCACAC TTGGGGCGGC TGTCGTGCTC GCCAGTCAGG GGTCGCATCT GCTCCAGGTC
GCGCTGCTCA TGGGCATCTT CGGCTTAGGC GCTGCCTTAC CAGTGGTGAC CTTGTCCTAT
GTCTCTCGGA GTGCCACGGC CAAAGCGCGC GGCAAACTGC TGCAGGCAGG CAACACTGGC
AAGGTTGCAA TGGGTGTCAT CATGATCGCA ATCGCGGGCC TTATCCTGAG CGGCGCCGAT
AAAGACATCG AAGCCTGGCT AGTGAATCAT TCTCCAGCAT GGCTTTCGGC ATTGACCACA
CGTTTTTGA
 
Protein sequence
MDIGLGSYGF GFLAGLLSTL SPCVLPLVPI LLGSATSVHR RAPLALAGGL AISYATIGTS 
LAWAGAALNL DTGVFRSVGA MVLALLGVVL MSGNLQQRFA VATSGVGDAG QSLISRLQPD
GMWGQFIVGL VLGVVWSPCV GPTLGAAVVL ASQGSHLLQV ALLMGIFGLG AALPVVTLSY
VSRSATAKAR GKLLQAGNTG KVAMGVIMIA IAGLILSGAD KDIEAWLVNH SPAWLSALTT
RF