| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3480 |
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| Symbol | |
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| ID | 8021166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012857 |
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| Strand | - |
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| Start bp | 23263 |
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| End bp | 24855 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644832273 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002983415 |
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| Protein GI | 241665056 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.129698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGTCC ACACTGCGCT ACCGCACTCC CATACCCAGG TCTTGCCGTT CAAGGAATCG
CTGCTTGCGA TGATCGGCAT CTGTTTTGTC GTGGTGCTGG TGGCATTCGA CCAGACCGTG
GTCGGTACCG CGTTGCCGAC GGTCGTGGCC GAACTCAAGG GTTTTGAGTT GTATGCCTGG
GTGGCGACGT CGTACCTGCT GACCTCGGTG GTCACGGTGC CGATCTTCGG CCGGCTGGGA
GACTTCTACG GCCGCAAGCC GTTCGTGATC GCATCCATCG TGGTGTTCAC GCTGGCGTCT
GTCATGTGCG GCATGGCCGG CAGCATGAAC TTTCTGGTGT GGTCGCGCGC GCTGCAGGGC
ATCGGCGGCG GCATGCTTGT CGGCACGGCG TATGCCTGCA TTCCCGATCT GTTTCCCGAT
GCGCGCGTAC GTTTGCGCTG GCAGGTCATG CTGAGCGCGT CGTTCGGTAT CGCCAATGCC
ATCGGGCCCA CGCTGGGCGG ATGGATGACG CAGGCGTTCG GTTGGCGCTC CGTGTTTTAT
GTGAACGTGC CGTTCGGCGC GTTGGGGCTA TGGTTTGCCT GGCGGTTTCT ACCGCATTTG
CGCCAGAACG CGCATGTCGG CCGCATCCGG CTGGATTGGC AGGGCGCGGT GCTGATCACC
GTGGCACTCG GTGCGTTGCA GCTCTTTGTG GAATGGCTGC CGCGCCATGG CGTGTCGGGG
CCACTGTTCG GGTGGCTGGC CTTGTCGGCC GCGGCATTCT TTGGCTTGTG GTGGTGGGAG
CAGCGCGCCG AGCAGCCGCT GTTGCCGTTC GACATGCTGC GTAACCCTTC GCTGGCGGCG
CTGTTCGTGC TGGCGACGCT CTCGGGCTTT TCGATGTTTG CGGTGCTGTT CTACGCGCCG
CTGCTGTTCC AGGGCGGGTT TGGCATGTCG CCGCAGGAGG CAGGGCTGGT CATCACACCG
CTGGTGGTCT GCATTACCCT CGGCAGCATC ATCAATGGGC GCATCGTCAC GCGCATTCCC
AAGCCGAACG CCATGCTATA TGCCGGGTTT GCGCTGCTGA CGTTGGCGCT GGCCGGCATG
GCGGTGTCGT CCAAGGCAAT GCCGCATGCC GTGTTGACGG GGCTGATGCT GCTGGCGGGC
CTCGGGCTGG GTTTTGTGTT GCCCAACCTG ACCGTGTTTG CACAGCAGAC GGCGGGGCGT
GCGCACCTGG GGATCGCCAC GGCGCTGCTG CAATCGCTGC GCATGGTGGG CGGCATGGTG
GGCACCGCGC TGGTCGGCAC GCTGGTGAGC GAGCGCTATG CCGCAGGGGT GGGCGAGGCG
CTGCGCGCTG ACGGTGCGAC GCAATGGCTG CGCCAGCTTG CCGATCCCGA GATTCTCATT
GATCATGACG CGCAAGCTGC CCTGCTCACA CAGATGCACG CAGCGGGCCA CGATGGCGCC
GCTCTTGTCG AGGCGGCCCG TCACGTGCTG GTCAGCGCCA TCCACATCGG CCTGGTCGCC
GCAACCGTGG TCGCCCTCGT GGCTCTCTGG CGCGTGTGCC GTGTGCCGCC GGTGGTGTTG
CATCATGTCG AGCCCGTGCA ACACACCGAA TAG
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| Protein sequence | MAVHTALPHS HTQVLPFKES LLAMIGICFV VVLVAFDQTV VGTALPTVVA ELKGFELYAW
VATSYLLTSV VTVPIFGRLG DFYGRKPFVI ASIVVFTLAS VMCGMAGSMN FLVWSRALQG
IGGGMLVGTA YACIPDLFPD ARVRLRWQVM LSASFGIANA IGPTLGGWMT QAFGWRSVFY
VNVPFGALGL WFAWRFLPHL RQNAHVGRIR LDWQGAVLIT VALGALQLFV EWLPRHGVSG
PLFGWLALSA AAFFGLWWWE QRAEQPLLPF DMLRNPSLAA LFVLATLSGF SMFAVLFYAP
LLFQGGFGMS PQEAGLVITP LVVCITLGSI INGRIVTRIP KPNAMLYAGF ALLTLALAGM
AVSSKAMPHA VLTGLMLLAG LGLGFVLPNL TVFAQQTAGR AHLGIATALL QSLRMVGGMV
GTALVGTLVS ERYAAGVGEA LRADGATQWL RQLADPEILI DHDAQAALLT QMHAAGHDGA
ALVEAARHVL VSAIHIGLVA ATVVALVALW RVCRVPPVVL HHVEPVQHTE
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