Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_3318 |
Symbol | |
ID | 8021002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 3497808 |
End bp | 3499715 |
Gene Length | 1908 bp |
Protein Length | 635 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644832111 |
Product | thiamine biosynthesis protein ThiC |
Protein accession | YP_002983254 |
Protein GI | 241664894 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCCAAG CCAAAAACGC CCCCGCCGCA TCGTTCGACT CGCTGCAGTC CGAGCTCGAC CAGAAGTTCG CCTATCCGGC CTCCAGCAAG ACGTACATCG TCGGCAGCCG CCCGGACATC CGCGTGCCGA TGCGCACCAT CAAGCAGACC GCCACGCGCA CCGACAAGGG CGAGATGCTG AACCCGCCGG TGCCGGTGTA CGACACCTCG GGCCCGTACT CCGATCCGGA CGTACACATT GACCTGAAGG CTGGCCTCGC CCCGCTGCGC GCCAAGTGGA TCGACGAGCG TGGCGATACG GAAATCCTCT CGGGGCTGTC GTCCGAATAC GGCCAGACGC GCGCCAACGA CCCGGCCACG GCGCACCTGC GCTTCTCGCA CATCTCCAAG CCGCGCCGCG CCAAGGCCGG CGCCAACGTG AGCCAGATGC ACTACGCGCG CCGCGGCATC ATCACGCCCG AGATGGAATA CGTCGCGCTG CGCGAATCGC TGAACCTGCA GGCGCTGCAA GACAAGCCCG AGTACCGGCA ACTGCTCAAG CAGCATCCGG GCTTCTCGTA CGGCGCGAAC CTGCCGCAGC GCCCGGAAGA CATCACGCCG GAATTCGTCC GTGCCGAAGT CGCCGCGGGC CGCGCGATCA TCCCCGCCAA CATCAACCAT ACCGAGCTGG AGCCGATGGC CATCGGCCGC AACTTCCGCG TGAAGATCAA CGGCAACCTC GGCAACTCGG CGGTCACGTC GTCGCTGGCC GAGGAAGTGG AAAAGATGGT GTGGGCGATC CGCTGGGGCG CCGACACGAT CATGGATTTG TCCACCGGCA AGCACATTCA CGAGACGCGC GAATGGATCC TGCGCAACTC GCCGGTGCCC ATCGGCACGG TGCCCATCTA CCAGGCGCTG GACAAGACCG GCGGCGTGGC TGAAGACCTG ACGTGGGAGA TGTTCCGCGA CACGCTGATC GAGCAAGCCG AGCAAGGCGT GGACTACTTC ACCATCCACG CCGGCGTGCT GCTGCGCTAC GTGCCGCTCA CGGCCGACCG CATCACGGGC ATCGTCTCGC GCGGTGGTTC GATCATGGCC AAGTGGTGCC TGGCGCATCA CAAGGAAAAC TTCCTGTACA CGCACTTCGA CGAGATCTGC GAAATCATGA AGGCGTACGA CGTGTCGTTC AGCCTGGGTG ATGGCTTGCG CCCCGGTTGC ATTGCCGACT CGAACGACGC CGCGCAATTC GGCGAGCTGC ACACGCTGGG CGAACTGACC AAGAAGGCGT GGGAGCACGA CGTGCAGGTC ATGATCGAAG GCCCGGGCCA CGTGCCGCTG CAGCGCGTGC AGGCCAACAT GGACGAAGAG CTGAAGCACT GCTTCGAAGC CCCGTTCTAC ACGCTTGGGC CCCTGGTGAC CGACATCGCC CCGGGCTACG ACCACATCAC CAGCGGCATC GGCGCGGCCA ACATCGGCTG GTACGGCACC GCCATGCTGT GCTACGTCAC ACCCAAGGAA CACCTGGGCC TGCCCGACAA GGAAGACGTG CGCGAAGGCA TCATCACCTA CAAGATCGCC GCGCATGCGG CCGACCTTGC CAAGGGCTGG CCGGGTGCGC AGCTGCGTGA CAACGCGCTG TCGAAGGCGC GCTTCGAATT CCGCTGGGAA GACCAGTTCA ACCTCGGCCT CGATCCGGAG AAGGCGCGCG CCTTCCACGA TGAAACGCTG CCGGCCGAGG GCGCCAAGAT CGCGCACTTC TGTTCGATGT GCGGTCCGAA GTTCTGCTCG ATGAAGATCA CGCAGGAAGT GCGCGACTAC GCGGCCACGC TCGACGCCAA CGCCACCGCC GCCGCAGTTA ACCCAACTGC GGGCATGGAA GAGAAGTCGA TCGAGTTCCG CAAGAGCGGC AGCAAGATCT ACAGCTAA
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Protein sequence | MPQAKNAPAA SFDSLQSELD QKFAYPASSK TYIVGSRPDI RVPMRTIKQT ATRTDKGEML NPPVPVYDTS GPYSDPDVHI DLKAGLAPLR AKWIDERGDT EILSGLSSEY GQTRANDPAT AHLRFSHISK PRRAKAGANV SQMHYARRGI ITPEMEYVAL RESLNLQALQ DKPEYRQLLK QHPGFSYGAN LPQRPEDITP EFVRAEVAAG RAIIPANINH TELEPMAIGR NFRVKINGNL GNSAVTSSLA EEVEKMVWAI RWGADTIMDL STGKHIHETR EWILRNSPVP IGTVPIYQAL DKTGGVAEDL TWEMFRDTLI EQAEQGVDYF TIHAGVLLRY VPLTADRITG IVSRGGSIMA KWCLAHHKEN FLYTHFDEIC EIMKAYDVSF SLGDGLRPGC IADSNDAAQF GELHTLGELT KKAWEHDVQV MIEGPGHVPL QRVQANMDEE LKHCFEAPFY TLGPLVTDIA PGYDHITSGI GAANIGWYGT AMLCYVTPKE HLGLPDKEDV REGIITYKIA AHAADLAKGW PGAQLRDNAL SKARFEFRWE DQFNLGLDPE KARAFHDETL PAEGAKIAHF CSMCGPKFCS MKITQEVRDY AATLDANATA AAVNPTAGME EKSIEFRKSG SKIYS
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