| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3272 |
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| Symbol | |
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| ID | 8020956 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 3455643 |
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| End bp | 3456857 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832067 |
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| Product | response regulator receiver modulated diguanylate phosphodiesterase |
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| Protein accession | YP_002983210 |
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| Protein GI | 241664850 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00166163 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGGTT TCGCGCAACT CGCCGTGCTG GTGGTGGATG ACCACCCCGT GCAACGGGCT
GCCGCCCGGC AACTGCTCCA TACGCTGGGC GTGCAGCAGA TCCTGACCGC GTGCGACGGC
CGCGAGGCGC TCTACCTCCT GCAGCTTTGC CACGTCGATC TGGTGCTGTG CGACATCGAC
ATGCCCGCGA TGAACGGTCC CGAACTGATG GAGCAGATGC ACTTGCGCGG CGGCCGCATC
TTTCCGCGAC AGGCGCCCGT GTGGGCGTGG GTCAGTGCGA TGGATGCGCC AATCGTCGAG
TCGCATGTCA GCCTGGCCGA TGCGATCGGG TTGACGCGCA CGCGCGGCGT GCAGAAGCCG
CTGCGCCCGG CACACGTGCT GCCGCTGCTG GAAGAAGCCG CCGCGCGCGA ACGGGACCGG
GCGCCTGCCG CAACCGCCGG CTTGCCGCAG TTTTCTGACG ACGAACTTGC CGCGCTTATC
CACGAAACGC CCGAGCAGAT CGAGGTCGTA TTCCAGCCCC AGCACGATCT GGCCAGCAAC
CAGATCGCCG GCGCCGAGGC GCTCTGCCGC TGGATGCACC CGGTGCATGG GCGCGTGTCG
CCCGCTGCGT TCGTGCCGCG CCTGGAAGCG CTGGGGCTGG CGGACGGCCT GTTCTTCCAC
GTGTTGGAGC ATTGCGTGCG CGTGCAGCAC GCGCTGTCCG CGCATGCGTA CCCCGTTTCG
ATTGGCGTGA ATGCGTCTGC GCAGACGCTG AGCCGGGCCG GCACCGTAGA CCGCATCGAA
GCGATCGTGC GCGGGGCGCG CATTGCGCCG ACGGCGATCG CCATCGAACT GACGGAAGAC
TCGCCCGTGC CTGATGCCGC GCAGCTCACC ATTGCGCTCA ACCGCTTGCG CCTGCTTGGT
CATCCGCTGG CCATCGATGA TTTTGGCGTG GGCATTGCCA CGCTCAAGCT GCTGGCGGAT
CTGCCCTTCA CCATTCTCAA GATCGATCGC TCTTTTACGG CCGCGGTGGA CCAGACCAGC
CAGCGCGGCG TGATCTGCCG CACGATGATC GAGCTGGCGC GCGCGCTGCA TCTCGAGTGC
ATCGCCGAAG GGGTGGAAAC CGAAGCGCAG CGCCAGACGC TGCGCGCTTT GGGCTGTGCG
ACCGGGCAAG GCTATCTGTG GGCGGCACCA CTGTCTGTCA CCGCGTTTCT TGCGCATGTG
CAGGCGGTGG CTTAA
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| Protein sequence | MEGFAQLAVL VVDDHPVQRA AARQLLHTLG VQQILTACDG REALYLLQLC HVDLVLCDID
MPAMNGPELM EQMHLRGGRI FPRQAPVWAW VSAMDAPIVE SHVSLADAIG LTRTRGVQKP
LRPAHVLPLL EEAAARERDR APAATAGLPQ FSDDELAALI HETPEQIEVV FQPQHDLASN
QIAGAEALCR WMHPVHGRVS PAAFVPRLEA LGLADGLFFH VLEHCVRVQH ALSAHAYPVS
IGVNASAQTL SRAGTVDRIE AIVRGARIAP TAIAIELTED SPVPDAAQLT IALNRLRLLG
HPLAIDDFGV GIATLKLLAD LPFTILKIDR SFTAAVDQTS QRGVICRTMI ELARALHLEC
IAEGVETEAQ RQTLRALGCA TGQGYLWAAP LSVTAFLAHV QAVA
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