Gene Rpic12D_3223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3223 
Symbol 
ID8020907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3405169 
End bp3405933 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content69% 
IMG OID644832018 
ProductYhhN family protein 
Protein accessionYP_002983161 
Protein GI241664801 
COG category[S] Function unknown 
COG ID[COG3714] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTGAAG GGCACACCAC GCATCCGGCG CACGCGCCGG CGCATCTGTC AGGCGGCTAC 
GGCATGCCGG CACGGGTTCG CGCGTGGTGG GTCGCTGCTG CCGTGGCAGG CGTGACCTAC
GGCGGCATGC TGACCATGGT GGCCGTAGAT GTACCGCCCG GCACCCCCCT GGTCGGTCGC
ATCGTCGCGC AGCCGCTGTG GAAAATGCTG ATGGCGCTGC TGCTGGCGCG CGCCGCATCG
CTGCACGAGA TTCCGCGCGA GCGGCGCTGG CTGATCGGCG CCATGATGTT TTCCGCACTC
GGGGATCTGT GGCTCGCTCT GCCGGGGCTC GCGTTCTCGT TCATGGCCGG GCTGGGCTGC
TTCCTGCTGG CGCATCTGTG CTATCTGCGG GTGCTGGTGG GGCTGCGCGG CGTGTCGTCG
GCCATCCGCA TGATCGGTGT GGGCGTGATG ATCGGCGTGG CCATCGGCAT GCTGTTGTGG
TACTGGCCGG GCCTGGGCGA ACTGAAGGGG CCGGTGATTG CCTACATGGT CGTGCTGTCG
GCGATGGTGT GCGCGGCATT GCTGGCGCGC CTGCCGGGGC CGCTGACGGC GTGGGGCGCA
CTCGCCTTCG CGGCTTCCGA CGCGATGATC GGTATCAGCG TGTTCGTCTT TCCGTTCACC
GACCACGAGC TGGCGATCTG GTGGAGCTAC GCCGCTGCGC AGCTGCTCAT CAGCGCGGGA
TTGCTCACGC GCCGCACACC GCCGCCGCGT CGCGCCGCTG CATAA
 
Protein sequence
MVEGHTTHPA HAPAHLSGGY GMPARVRAWW VAAAVAGVTY GGMLTMVAVD VPPGTPLVGR 
IVAQPLWKML MALLLARAAS LHEIPRERRW LIGAMMFSAL GDLWLALPGL AFSFMAGLGC
FLLAHLCYLR VLVGLRGVSS AIRMIGVGVM IGVAIGMLLW YWPGLGELKG PVIAYMVVLS
AMVCAALLAR LPGPLTAWGA LAFAASDAMI GISVFVFPFT DHELAIWWSY AAAQLLISAG
LLTRRTPPPR RAAA