| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_3214 |
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| Symbol | |
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| ID | 8020898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 3396136 |
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| End bp | 3397770 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644832010 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_002983153 |
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| Protein GI | 241664793 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATACCT ACGACTACAT CATCATCGGC GCAGGCTCCG CCGGCTGCGT CCTCGCCAAC
CGGCTGACCC GCGACCCCGA CGTTTCCGTC CTGCTGCTCG AAGCGGGCGG CAAGGACGAT
TACCACTGGA TCCACATCCC CGTCGGCTAT CTGTATTGCA TCGGCAACCC GCGCACCGAT
TGGCTCTATC GCACGCGCGA AGAGCCCGGG CTGAACGGTC GCTCGCTGGG GTATCCGCGC
GGCCGCGTGC TGGGGGGCTG CTCGTCGATC AACGGCATGA TCTATATGCG GGGCCAGCGC
GAAGACTACG ACGGCTGGGC CGCCATCACG GGCGACGATT CATGGAAATG GGATGCGGTG
CTGCCGCTCT TCAAGGCCAG CGAAAACCAC CACGGCGGTG CCAACGAATG GCACGGCGCC
AACGGCGAAT GGCGCGTCGA GCCGCAACGC CTGCACTGGC AGGTGCTGGA GACCTTCATC
GAGGCGGCCG TGCAGGCGGG CATCCCGCGC ACGAGCGACT TCAACCGCGG CGACAACTTT
GGCGTCGGCT ACTTCGAGGT CAACCAGAAA CGCGGCATCC GCTGGAACAC GGCCAAGGGC
TTTCTGCGCC CGGCATCGCA GCGGCCGAAC CTGACCATCG TGACGGGTGC GCAAGTCCGG
GCGCTGACGT TTGACGGCAA GCGCTGCACT GGCGTGACGT ATCGCGGGGC CGGGCAAGAC
TACACCGTGG CCGCGCGCGA AGAGGTGATC CTGTCGGCCG GCGCGATCAA CTCGCCGCAA
TTGCTGGAGC TGGCCGGCAT TGGTCAGCCG GAACGTCTGC AGGCGCTCGG CATTCCGGTG
CGCCAGGCGC TGCCGGGTGT CGGAGAAAAC CTGCAAGACC ACCTGCAGCT GCGCAGCGTG
GTCAAGGTGC ACGGCGTGCC CACGCTCAAC ACGCGCGCCT CGAACTGGTG GGGCAAGGCG
CTCATCGGCA TGCAATACGC GTTCAACCAG AGCGGGCCGA TGAGCATGGC GCCGTCGCAG
TTGGGCGTGT TCGCGCGCTC GAACCCGCAC GTGTCGCGGC CCGATGTGGA GTATCACGTG
CAGCCGCTTT CGCTCGACAA GTTCGGCGAT CCGCTGCACG CGTTCAATGC GTTTACCGCG
AGTGTGTGCA ACCTGCGGCC GACCTCGCGC GGCACGGTGC ATGTCACGTC CACCGATCCG
TTTGCGGCAC CGACCATCGC GCCGAACTAC TTGTCGACCG AGGAAGACCG CAAGGTCGCG
GCCGATTCGC TGCGCCTCAC GCGCCGCATC GTCGCGCAAC CGGCCTTGGC GCAATACAAG
CCGGAGGAGT ACCTGCCCGG CGCCGCGTTC CAGACCGACG AGGAACTCGC CCGCGCAGCC
GGAGAAATCG GCACGACCAT CTTCCACCCG GTCGGCACGT GCCGCATGGG CCGCGCCGAT
GACGCAAACG CCGTGGTCGA TGCGCAGCTG CGCGTGCGCG GCATCGACGG CCTGCGGGTG
GTCGACGCGT CCGTCATGCC GACGATTACG TCGGGCAATA CCAACTCGCC GACTATCATG
ATTGCGGAGA AGGCGAGCGA GATGATTCGT GCCGCGCGCA AGGCCCGCGC GCGCGGTGAG
GCCGTGCCAG CCTGA
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| Protein sequence | MDTYDYIIIG AGSAGCVLAN RLTRDPDVSV LLLEAGGKDD YHWIHIPVGY LYCIGNPRTD
WLYRTREEPG LNGRSLGYPR GRVLGGCSSI NGMIYMRGQR EDYDGWAAIT GDDSWKWDAV
LPLFKASENH HGGANEWHGA NGEWRVEPQR LHWQVLETFI EAAVQAGIPR TSDFNRGDNF
GVGYFEVNQK RGIRWNTAKG FLRPASQRPN LTIVTGAQVR ALTFDGKRCT GVTYRGAGQD
YTVAAREEVI LSAGAINSPQ LLELAGIGQP ERLQALGIPV RQALPGVGEN LQDHLQLRSV
VKVHGVPTLN TRASNWWGKA LIGMQYAFNQ SGPMSMAPSQ LGVFARSNPH VSRPDVEYHV
QPLSLDKFGD PLHAFNAFTA SVCNLRPTSR GTVHVTSTDP FAAPTIAPNY LSTEEDRKVA
ADSLRLTRRI VAQPALAQYK PEEYLPGAAF QTDEELARAA GEIGTTIFHP VGTCRMGRAD
DANAVVDAQL RVRGIDGLRV VDASVMPTIT SGNTNSPTIM IAEKASEMIR AARKARARGE
AVPA
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