Gene Rpic12D_3125 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3125 
Symbol 
ID8020809 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3296871 
End bp3297533 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content65% 
IMG OID644831921 
Producthypothetical protein 
Protein accessionYP_002983064 
Protein GI241664704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGAC TGACCCCCAT CGTTCTGACG GCGCTCACAT TGGCGCTGGC CGCCGGCACC 
GCGCAGGCAG CGGACGCCAC CTCCAAGGCC GTCACCGCAC CCAAGCCCGA AGCCAAGGCC
GACGCGGCAC TCGCCAAGGT CATCCAGGAG AGCTTTGTCT CCAAGGGCCC GGCCACCGTG
GAAGGCGTGA CCGACCGCGA CGACGTGCAA AAGGTCTGCA GCCAGTTTGC CGACCGCAAC
GCCGTGCCCG CCGCCGTGGC AAAGAAGCTG GAAGACGCGC AATTCAAGAC CATCCACTAC
CCGGCAGACA ACACCTGGCT GGGCGACTGG AAGGAAGGGG AGAAGACCGC GCAGAGCGGC
CGCGGCATGC AGTTCTCCGA CCCGGCCGGC ACTGTGAACG GCGCCAATTG CTACGCCTGC
CACCGCTTGT CGAAAGACGA ACTGTCGTAC GGCACCATCG GCCCGTCGCT GTACCAGTAC
GGCAAGCTGC GCGGCGATTC GGAGGCGATC CTGCGCTACA CGTGGGGCAA GATCTACAAC
TCCAACGCGT ATGCGGCGTG CTCCAACATG CCGCGCTTCG GGCACAAGGG CATCCTGACC
GAGCAGCAGA TCCGCGACGT GATGGCGCTG TTGTTCGACC CGGCATCTCC CGTCAACCAG
TGA
 
Protein sequence
MTRLTPIVLT ALTLALAAGT AQAADATSKA VTAPKPEAKA DAALAKVIQE SFVSKGPATV 
EGVTDRDDVQ KVCSQFADRN AVPAAVAKKL EDAQFKTIHY PADNTWLGDW KEGEKTAQSG
RGMQFSDPAG TVNGANCYAC HRLSKDELSY GTIGPSLYQY GKLRGDSEAI LRYTWGKIYN
SNAYAACSNM PRFGHKGILT EQQIRDVMAL LFDPASPVNQ