Gene Rpic12D_3100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3100 
Symbol 
ID8020783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3270709 
End bp3271962 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content67% 
IMG OID644831895 
Productheat shock protein 
Protein accessionYP_002983039 
Protein GI241664679 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0443] Molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTCAA ACGCCTGCGG CGTCGATTTC GGCACGTCCA ACTCCACCGT CGGCTGGCTG 
AGACCGGACG CACCCACCCT GCTGCCGCTC GAAGACGGCA AGGCGACTCT GCCTTCCGTC
ATCTTCTTTC ACGCCGAAGA CCCGACGGTC AGCTACGGCC GTGCCGCGCT GGCCGACTAT
CTTGCCGGCT ACGAGGGCCG CTTGATGCGC TCGCTCAAGA GCCTGCTCGG CACATCAATG
ATGGACGACA GCACCGAGGT CATGGGCCAA GCCATGCCCT TCCGCAAGCT GCTGGCGCAT
TTCATTGGCG AACTCAAGCG GCGCGCCGAG CATGCCGCCG GCCATGAATT CCGCCGCGCC
GTGCTGGGCC GCCCGGTGTT CTTCATCGAC GAAGACCCCA AGGCCGACCA GCTTGCCGAA
GACACGCTGT CGGACATCGC GCGCGACGCC GGCTTTGACG AGATCGCCTT CCAGTACGAG
CCCATCGCCG CCGCGTTCGA CTACGAGGCC GGCATCAGCG GTGAAGAACT TGTGCTGGTG
GCCGACATTG GCGGCGGTAC GTCCGACTTC TCGCTCGTGC GCCTGTCGCC CGACCGCGCG
AAACGCCTTG ACCGCCGCGA AGACATCCTC GCCAACGGCG GCGTGCACAT CGGTGGTACC
GACTTCGACC GCGCCCTGAG CCTGGCCAGC GTGATGCCGC TACTGGGCCT GAACAGCACG
CTGCGCAACG GCAAGGCCAT GCCGTCCGGC CAGTATTTCG ACCTGGCGAG CTGGCACACC
ATCAACCACG TGTACACGCG CAAGGCGTGG ACGGTGGTGA TGGACAACTA CCGAGATGCC
GCCGACACCG AAAAACTCGA CCGCCTCATC CGCCTGATCC GCGAGCGCGC CGGCCACTGG
CTGGCCATCC AGGTGGAAGC CGCGAAGATC GCGCTGTCGG ACGCCCCGGT GGGGGAGATC
GACCTGCACC GCATCGCGCC CGAGTTGAAG CAGTCCGTCA CGCGCGAAGA CTTCGACCAG
TCGATCGGGA AGCTGGTCGG CAAGACGGTC TCGACGGTGC AAGCGATGCT GAAGACGGCG
GGCGTCGCAG CGGAAGCGGT CGATACCATT CTCTTCGCCG GCGGCTCCAG CGGGGTGCCG
TTGCTGCGCG AGCAACTGGC GCAAGTGCTG CCGTCGGCGC GGCGCGTCGA GGGCGACCTG
TTCGGCGGGA TCGGTTCTGG CCTGGCGCGC GATGCGGCGC GCCAGTTTGG CTGA
 
Protein sequence
MMSNACGVDF GTSNSTVGWL RPDAPTLLPL EDGKATLPSV IFFHAEDPTV SYGRAALADY 
LAGYEGRLMR SLKSLLGTSM MDDSTEVMGQ AMPFRKLLAH FIGELKRRAE HAAGHEFRRA
VLGRPVFFID EDPKADQLAE DTLSDIARDA GFDEIAFQYE PIAAAFDYEA GISGEELVLV
ADIGGGTSDF SLVRLSPDRA KRLDRREDIL ANGGVHIGGT DFDRALSLAS VMPLLGLNST
LRNGKAMPSG QYFDLASWHT INHVYTRKAW TVVMDNYRDA ADTEKLDRLI RLIRERAGHW
LAIQVEAAKI ALSDAPVGEI DLHRIAPELK QSVTREDFDQ SIGKLVGKTV STVQAMLKTA
GVAAEAVDTI LFAGGSSGVP LLREQLAQVL PSARRVEGDL FGGIGSGLAR DAARQFG