Gene Rpic12D_3028 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_3028 
Symbol 
ID8020711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3198426 
End bp3199448 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID644831825 
Productmolybdopterin dehydrogenase FAD-binding 
Protein accessionYP_002982969 
Protein GI241664609 
COG category[C] Energy production and conversion 
COG ID[COG1319] Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAATCGA TTGCTTATGA CCTTGCATCT TCCGTCGAGG CCGCCGTGCG CCTGGGCAAC 
GAGCCGGGCG CGCGCTACAT CGGCGGGGGG ACGAATCTGC TGGACCTGAT GAAGGGCGGC
GTCGAGCAAC CGCAGCGGCT GGTGGACGTG AGCCGCCTGC CGTTGGCGCA GATTCGCGCG
TTGCCCGACG GTGGCCTGCG CCTGGGCGCG ATGGCGCGCA ATGCCGACAC GGCGGCGCAT
CCGCTGGTGC GCTCGCGCTA TCCGCTCCTG AGCGAAGCGA TTGTCTCGGG TGCGTCGGGG
CAGCTGCGCA ACATGGCCAC CAACGGCGGC AACCTGATGC AGCGCACGCG TTGCCATTAC
TTCTACGACA CGGCGTACCC GGCGTGCAAC AAGCGGCAGC CCGGTTCCGG CTGTGCCGCG
CGCGAGGGCT TCAATCGCAT GCACGCCATC CTCGGCGCCA GCGAGGCCTG CGTGGCGACG
CATCCGTCCG ACATGGCTGT CGCCTTGGCC GCGCTCGACG CCACAGTGGT GGTGCACGGC
GCGCACGGTG AGCGGCGTAT CCCGATCGAC GCGTTCCATC GGCTGCCGGA AGCGCACCCC
GAAATCGACA CGACACTCGG GCCCGGCGAG TTGATCGTCG CCATCGATCT GCCGCCGCCC
GTGTTCGGCT CGCACGTGCA TTACCTGAAG GTGCGCGACC GTGCCAGTTA TGCGTTTGCG
CTGGTATCGG TGGCTGCGGC GCTGGCCTTG CAGACCGATG GGCGCACGAT TCGGGCGGCG
CGCATTGTGC TCGGCGGCGT CGCGCACAAG CCGTGGCGGG CGCATGCGGC CGAGCAGATG
CTGGTGGGCC AGGCGGTGGA TGCGCAGTTG TTTGCCCAGG CGGGCGCGCT GGCCGTGCAG
GGCGCCCGGC CGCTGCGCGA CAACGGCTTC AAGGTGCCGC TCGCACAGCG GGCGGTGGCC
CGGGCGCTCA CCATCGCGGC CAATCCCGCC AATCCCGCCA AGCCGACAGG AGGTGTGGCA
TGA
 
Protein sequence
MQSIAYDLAS SVEAAVRLGN EPGARYIGGG TNLLDLMKGG VEQPQRLVDV SRLPLAQIRA 
LPDGGLRLGA MARNADTAAH PLVRSRYPLL SEAIVSGASG QLRNMATNGG NLMQRTRCHY
FYDTAYPACN KRQPGSGCAA REGFNRMHAI LGASEACVAT HPSDMAVALA ALDATVVVHG
AHGERRIPID AFHRLPEAHP EIDTTLGPGE LIVAIDLPPP VFGSHVHYLK VRDRASYAFA
LVSVAAALAL QTDGRTIRAA RIVLGGVAHK PWRAHAAEQM LVGQAVDAQL FAQAGALAVQ
GARPLRDNGF KVPLAQRAVA RALTIAANPA NPAKPTGGVA