| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2991 |
|---|
| Symbol | |
|---|
| ID | 8020673 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 3155280 |
|---|
| End bp | 3156596 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644831788 |
|---|
| Product | N-acylglucosamine 2-epimerase |
|---|
| Protein accession | YP_002982933 |
|---|
| Protein GI | 241664573 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2942] N-acyl-D-glucosamine 2-epimerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.741149 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGACA GAACAGATAC GAGCAACCGG CCCGACGAGA ATGGGTCGGC GCCCGCCACG
ATCATCACGG CGCACATGCT TTCACAACCC TCCACGCCCC CGCCGCCCGA TACGGCCACG
ACCGAACCGT CCGCCGCGAT TGCGGCGGCG CTGGAATCCT TCGACCGCTA CTACGACGAC
GTCCTGCTGC CCATGTGGCT GGGCCCCGGC TGGAATGCTC AGGCCGGCCT CTGCTATGAG
GCGCTCGTCG TCGACAACGG CGCGCTGGTG CCGGCATCCA CCGCACGCTA CCGGGCGATG
GCGTGTGCGC GGCAGTTGTA TACCTTCGCG CGTGCCACGC AACTCTCCGA GCGACATCGC
GATCTCTGCG CCGAACGCGC CGCCGCGCTG TGCCATGCGC TGGACACCCG CTTTCGCGAC
ACGATCCAAG ACGGCTGGCT GTTTGCGATC GACAGCGCGC TGGCCCCGCA CGACACCACG
AAGGATCTGT ATACGCACGC CTTTGTGCTG TTTGCCGCCG CACATTGGCT GGCCGTGAGT
GACGACCCGC GTGCCGCCGC GCTGATGCAC GACGCGCACG ATGTGATCAC GCGCCGCTTT
GCGCGGGCCG GAGCCCAACC GCTGCCGGTC GCATCCATGG ACGGCACGTT CAGCACCACG
CTGGCCGGTG TCGCGCAGAA CCCGGTGATG CATCTGACCG AGGCGTACCT GGCCGCCGCC
GCGCTGGACG AACCGCCCGC CTGGGCCGAG GCAGGCGTGC GCACGCTGGC CGAGGGCATC
CTTGCGCGCT TCATCGATAC GCGTACGGGC AGCATCACCG AGTTGCCGGT TGACGAGGCC
AGCACCGACA ACCGCATCGA ACCCGGTCAC CAGTTCGAAT GGTTTTATCT CGTGCGAGGA
CACGCCGCTG TCTTCACGCG GTCCGAAGCC GGCCGCCGCC TGGCCGAAAC CCTCGCCCGC
GCGGTGGATG CCGCCTGCGC CGATGGCGTG GATGCCGAGA CGCAGGGCGT GTGCCTGGCG
CTCAATCTGG ACGGCACGAT GCGCGACGCC AGCCAGCGCA TCTGGGCGCA GACGGAATAC
GGCCGCGCGC TCGCGCTCTG CACCGAAACG CAGGGCGCCA TGCTCGCGCG CCTTCTGCCG
GCGTGGTCTG CGCGCTTCCT GCATGCGCAA GGCTGGAACG AAGTGGTCGA CCCCGCCGGC
CAGCGCCTGC GCGCCGACAT GCCATCGAGC ACGCCGTATC ACATCACCAC CTTTTATGAG
GCGGCCCGCA GCGCGCTGTC CGGCTCGCCC GCACGTTGTA CCCAAGCTGT TCAGTGA
|
|---|
| Protein sequence | MVDRTDTSNR PDENGSAPAT IITAHMLSQP STPPPPDTAT TEPSAAIAAA LESFDRYYDD
VLLPMWLGPG WNAQAGLCYE ALVVDNGALV PASTARYRAM ACARQLYTFA RATQLSERHR
DLCAERAAAL CHALDTRFRD TIQDGWLFAI DSALAPHDTT KDLYTHAFVL FAAAHWLAVS
DDPRAAALMH DAHDVITRRF ARAGAQPLPV ASMDGTFSTT LAGVAQNPVM HLTEAYLAAA
ALDEPPAWAE AGVRTLAEGI LARFIDTRTG SITELPVDEA STDNRIEPGH QFEWFYLVRG
HAAVFTRSEA GRRLAETLAR AVDAACADGV DAETQGVCLA LNLDGTMRDA SQRIWAQTEY
GRALALCTET QGAMLARLLP AWSARFLHAQ GWNEVVDPAG QRLRADMPSS TPYHITTFYE
AARSALSGSP ARCTQAVQ
|
|---|
| |