Gene Rpic12D_2855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2855 
Symbol 
ID8020527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp3012697 
End bp3013194 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID644831642 
ProductClpXP protease specificity-enhancing factor 
Protein accessionYP_002982797 
Protein GI241664437 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.408921 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAAA CCTCCACCAA GCCCTATCTG ATCCGAGCCA TCTATGAGTG GTGCACGGAT 
AACGGCTTTA CGCCGTACAT CGCTGTCTTC GTCGACAACA GTACCAACGT GCCGCGCGAG
TTCGTCAAGA ACGACGAGAT TGTGCTGAAC GTGAGCTTTG ACGCGACCAG CCAGCTCGAC
ATGGGCAACG AGTGGATCAC GTTCCACGCA CGCTTCTCGG GCGTGTCTCG CAAGATCGAG
GTGCCGATCG AGAACGTGCT CGCCGTGTAC GCGCGCGAGA ACGGTCAAGG TATGGCATTC
CCGGTGGAGC GCAGCACCCC GACGACCCCG GCGGCGACCG AACGCGAGAA CAATCCGCCG
CCCAAGCTGG CCGCGGTGGA TTCGGAGTCG GCACCTGCGC CGGTCCCCGC CGAAGCGGAA
ACAGGCCCGG AAGACGAGCC CACTCCGCCA AACGTGCCAC GCATCGGTGG AAAGCCCGCG
CTAAAGGTCG TCAAGTAA
 
Protein sequence
MSETSTKPYL IRAIYEWCTD NGFTPYIAVF VDNSTNVPRE FVKNDEIVLN VSFDATSQLD 
MGNEWITFHA RFSGVSRKIE VPIENVLAVY ARENGQGMAF PVERSTPTTP AATERENNPP
PKLAAVDSES APAPVPAEAE TGPEDEPTPP NVPRIGGKPA LKVVK