Gene Rpic12D_2814 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2814 
Symbol 
ID8020485 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2983146 
End bp2984168 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID644831601 
Productubiquinol oxidase, subunit II 
Protein accessionYP_002982757 
Protein GI241664397 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR01433] cytochrome o ubiquinol oxidase subunit II 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGTGC GCATCGCCGG CGCAATTGTG CAAGACATGA AGAACACACT CGTTCCACAT 
ATGAAGCGGC TCCTCGCCGC AAGCCTCCCG CTCCTGCTGG CGGGTTGCAA CCTGACGGTC
CTGGACCCGA AGGGGATGAT TGCGGCTGAA GAAAAGACGC TGATCCTGGT GGCGACCGGC
CTGATGCTGC TGGTGGTCAT TCCCGTGATC GTGTTGACGC TGGTGTTTGC GTGGAAGTAC
CGCGCGTCCA ACACCAAGGC CCGCTACGAG CCGGACTGGT CGCACTCCAA CGCCATCGAA
GCCGTGGTGT GGCTGATTCC CTGCCTGATC ATCATCGTGC TGGGCGTGAT CACCTACAAG
TCCACGCACG CGCTCGATCC GTACAAGCCG ATCGAATCGG ATGTGAAGCC CATCACGGTC
GAGGCGGTTT CGCTCGACTG GAAGTGGCTG TTCATCTATC CGGAATTGAA GATCGCGACG
GTCAATCAGC TCGCATTCCC GGCCAATACC CCGATCAACT TCAAGATCAC GTCCGACACG
GTGATGAACG CGTTCTTCAT CCCGCAGCTG GGTAGCCAGG TGTATGCCAT GGCCGGCATG
CAGACCAAGC TGCACCTGAT CGCCAACGAG ACGGGCGTGT TTGACGGCAT GTCGTCGAAC
TACAGCGGCT CGGGCTTCAC GGGCATGAAG TTCAAGGCCA CGGCCATGAC GAACGAAGAG
TTCGATGCCT GGGTGAAACA GGTGCGCGCC TCGTCGCAGA ACCTGACCAA GGAAGGCTAC
GCCGAGCTGT CCAAGCCGAG CGAGAAGGTG CCGCCCGCGG CGTACGCATC GGTCGACCCG
ATGCTGTATC ACAGCATCCT GCACAAATAC ATGGACAAGA TGGGCGAAGG GGAGAAGGTC
CTGACGCTCG ACGAGGCGCT CGAAGGCGCC AACTGCACGA CGGCCACGGC TGAGGCGGCA
ACGCGCCCGC TGCCGGTGCA GTCCGCCCTG CCTGCGCCCA AGAGCGCGGC CAAGAATTCC
TAG
 
Protein sequence
MLVRIAGAIV QDMKNTLVPH MKRLLAASLP LLLAGCNLTV LDPKGMIAAE EKTLILVATG 
LMLLVVIPVI VLTLVFAWKY RASNTKARYE PDWSHSNAIE AVVWLIPCLI IIVLGVITYK
STHALDPYKP IESDVKPITV EAVSLDWKWL FIYPELKIAT VNQLAFPANT PINFKITSDT
VMNAFFIPQL GSQVYAMAGM QTKLHLIANE TGVFDGMSSN YSGSGFTGMK FKATAMTNEE
FDAWVKQVRA SSQNLTKEGY AELSKPSEKV PPAAYASVDP MLYHSILHKY MDKMGEGEKV
LTLDEALEGA NCTTATAEAA TRPLPVQSAL PAPKSAAKNS