Gene Rpic12D_2787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2787 
Symbol 
ID8020458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2954321 
End bp2954818 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content62% 
IMG OID644831574 
Producthemerythrin-like metal-binding protein 
Protein accessionYP_002982730 
Protein GI241664370 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2703] Hemerythrin 
TIGRFAM ID[TIGR02481] hemerythrin-like metal-binding domain 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.107285 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACC AGACTCCCTC CCGCGCCCCA ACCACACGGG ATACCAGTGC GCCGACGCCG 
GCCAGCGACA ACAGTCTCGC CTGGTCCGAT ATGCGTCTCC TCGGGTTCAC GCCCATGGAC
GACGTGCACG AGGAGTTTCA CACGCTTGCA CTGAAACTGG TGACCTGCTC GGATGCGAGC
GCCGCCGATG CAATCGAACG ATTCGAGCAG CACGCGATCA GCCATTTTGA GCAGGAAGAT
GAATGGATGC GCTCCACCAA CTTCCCTCCG CGGGACTGCC ACCTCGCCGA GCATGCGGCT
GTGCTCAAAT CGGTCGGTGA CGTCAAGCAA GCCGTGGCGC TAGGAGAGGC CGGCGCCGAC
GTGGTTCGAA GCTTGGGGAT GGCTCTCTTT GACTGGTTCC CGATTCATGC CGACTACCTG
GATTCCGCGC TGGCAGCCTG GATGACAAAA CAGACCATGG GCGGAAAGCC CATCGTGTTG
CGCCGCACGC TCGCCTGA
 
Protein sequence
MSDQTPSRAP TTRDTSAPTP ASDNSLAWSD MRLLGFTPMD DVHEEFHTLA LKLVTCSDAS 
AADAIERFEQ HAISHFEQED EWMRSTNFPP RDCHLAEHAA VLKSVGDVKQ AVALGEAGAD
VVRSLGMALF DWFPIHADYL DSALAAWMTK QTMGGKPIVL RRTLA