Gene Rpic12D_2652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2652 
Symbol 
ID8020316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2796709 
End bp2797416 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content64% 
IMG OID644831432 
Productdinucleoside polyphosphate hydrolase 
Protein accessionYP_002982595 
Protein GI241664235 
COG category[L] Replication, recombination and repair
[R] General function prediction only 
COG ID[COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.070466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGATC GTGAAGGCTT CCGCCCGAAC GTCGGCATCA TCCTCATCAA CGCAAGAAAC 
GAGGTGTTCT GGGGCAAGCG CATTGGCGAG CACTCCTGGC AGTTTCCACA AGGCGGCATC
AAATACGGCG AAACGCCCGA ACAAGCGATG TTCCGCGAAC TGCACGAAGA AGTCGGCCTG
TTGCCAGAAC ACGTCCGGAT CGTCGGTCGC ACGCGCGACT GGCTGCGGTA TGAGGTGCCG
GACAAGTTCA TCCGCCGCGA AATACGCGGC CACTATCGGG GCCAGAAACA GATCTGGTTC
CTGCTGCGCA TGGTCGGTCG CGACTGCGAC ATCCAACTGC GTGCCACCGA GCATCCGGAA
TTCGATGCGT GGCGGTGGAG CCAGTACTGG GTGCCGCTCG AAGCCGTCAT CGAGTTCAAG
CGCGAGGTGT ATCAGCTGGC GCTGTCGGAG CTTTCCCGCT TCGTGCAGCG TCAGACCCGT
GCGCCGCTGT CACCCTACGG GCGCGGCGGC CAGCACCGCG AGCGCGATGG ACGCGATGGG
CGCGAGAGCC GTGAGCGATC CGGCGGCCAA GGCGGCCGGA ACGAGCAGTA CGCCCAGCCG
GCCCTGGCCG TCACCACCAC GACGGTCATC GTCGAAACGG TGAGCGTATC CGCACCGGCC
CCTTCCTCTC CCAACCCCGA CGACACGTCT CCCAAGGACA ATTCGTGA
 
Protein sequence
MLDREGFRPN VGIILINARN EVFWGKRIGE HSWQFPQGGI KYGETPEQAM FRELHEEVGL 
LPEHVRIVGR TRDWLRYEVP DKFIRREIRG HYRGQKQIWF LLRMVGRDCD IQLRATEHPE
FDAWRWSQYW VPLEAVIEFK REVYQLALSE LSRFVQRQTR APLSPYGRGG QHRERDGRDG
RESRERSGGQ GGRNEQYAQP ALAVTTTTVI VETVSVSAPA PSSPNPDDTS PKDNS