Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2507 |
Symbol | |
ID | 8020171 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2632254 |
End bp | 2632970 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644831288 |
Product | alanine racemase domain protein |
Protein accession | YP_002982451 |
Protein GI | 241664091 |
COG category | [R] General function prediction only |
COG ID | [COG0325] Predicted enzyme with a TIM-barrel fold |
TIGRFAM ID | [TIGR00044] pyridoxal phosphate enzyme, YggS family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.813169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGCAA TCGTCGCCAA CTTGCAAGCC GTGCGTCAAC GGATCACAAC GGCCTGCACA CTGGCTTCGC GCGATGCTGC GGGTGTCACA TTGCTGGCCG TTTCCAAGAC GTTCGACGCC GATGCCATAC GCGCCGCGCA TGCCGCCGGG CAACGCCTCT TCGGCGAAAA CTACGTGCAG GAAGGCGTTG CCAAGATCGA CGCGCTGGCC GATCTGCGCA AGGGCACCGA CCCGATCCGC TGGCACTTCA TCGGCCCCCT GCAGAGCAAC AAGACGCGCG CCGTGGCCGA ACAGTTCGAC TGGGTGCACA GCGTCGATCG CCTGAAGATC GCCGAGCGGC TGTCGGCGCA GCGCCCGGAC ACCTTGCCGC CGCTGCAGGT CTGTCTCGAG ATCAATATCA GCCGCCAGGC CAGCAAACAT GGTCTGCTCC CCGATTTCGA TGAAGTGCTT GCCGTGGCAC AAGCCGTCTT GGCGCTGCCC CGTCTGCAAT TGCGCGGCCT GATGGCCGTG CCCGAGCCGA GCGATGACCC CGTGGCGCAG CGCAAGCCGT TTGCTGATCT GCGTGCCCTG GCAGGCCGGT TGCGCGAGGC CGGCATCCCG CTCGATACGC TCTCGATGGG CATGTCCGCC GACCTGGAAG ACGCGATTGC CGAAGGCGCC ACGATTGTGC GCGTCGGCAG CGCCATCTTC GGCGCGCGGC ATTACGCCAA CGCCTGA
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Protein sequence | MSAIVANLQA VRQRITTACT LASRDAAGVT LLAVSKTFDA DAIRAAHAAG QRLFGENYVQ EGVAKIDALA DLRKGTDPIR WHFIGPLQSN KTRAVAEQFD WVHSVDRLKI AERLSAQRPD TLPPLQVCLE INISRQASKH GLLPDFDEVL AVAQAVLALP RLQLRGLMAV PEPSDDPVAQ RKPFADLRAL AGRLREAGIP LDTLSMGMSA DLEDAIAEGA TIVRVGSAIF GARHYANA
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