| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2403 |
|---|
| Symbol | |
|---|
| ID | 8020067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2523700 |
|---|
| End bp | 2524506 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 644831184 |
|---|
| Product | 3-deoxy-manno-octulosonate cytidylyltransferase |
|---|
| Protein accession | YP_002982347 |
|---|
| Protein GI | 241663987 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
|---|
| TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.246245 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCACG CGCCGTTCAT CGCTGTCATT CCCGCGCGGC TGGCGTCCAC GCGGCTGCCC
AACAAACCGC TGGCCGACAT CGACGGCAAG CCGATGGTGG TGCGCGTGGC TGAACGCGCG
CATCAGTCAT CCGCCGCGCG CGTGGTGGTT GCCACCGATG CAGCGTCGGT CGCCGACGCC
TGCATGCAGC ATCACGTGGA AGCCGTGCTC ACGCGTGCCG ACCACGCATC CGGCACCGAC
CGTCTGGCCG AAGTGGCCAC CGTTCTGGGC CTGCCCGATG ACGCCATCGT CGTGAACGTG
CAAGGCGATG AGCCGCTGAT CGCACCGACG CTGATCGACA ACGTGGCCGC GCATCTGCGC
GACCACCCCG ACTGCGCCAT CGCCACTGCT GCGCATCCGA TCCACGACCC GGCCGACGTA
TTCAATCCAA ATGTCGTCAA GGTGGTGCTC GACGCCGCCG ATCGCGCACT GTTGTTCTCG
CGCGCACCGC TGCCGTGGGC GCGCGACACT TGGACACCCG CGGTCATGGC GCAACCCGTT
GCCGAGCGCC CGTTGCCGGC CATGCCCGTG CTGCGCCATA TCGGCATCTA CGCGTACCGC
GCCGGGTTCC TGCGCCGCTT CCCGCAATTG GCTGCCGCCC CCATCGAGCA AACCGAACAG
TTGGAGCAGC TACGCGCGAT GTGGCACGGT GAGCGCATTG CTGTGCTGAC CACCGATGAC
GCCCCCGCCG CCGGAGTCGA CACCTCCGAA GACCTCGCCC GGGTGCGCGC TGCCTGGGCT
GAACTCCTCG CGCAGGACGG CCCTTGA
|
|---|
| Protein sequence | MSHAPFIAVI PARLASTRLP NKPLADIDGK PMVVRVAERA HQSSAARVVV ATDAASVADA
CMQHHVEAVL TRADHASGTD RLAEVATVLG LPDDAIVVNV QGDEPLIAPT LIDNVAAHLR
DHPDCAIATA AHPIHDPADV FNPNVVKVVL DAADRALLFS RAPLPWARDT WTPAVMAQPV
AERPLPAMPV LRHIGIYAYR AGFLRRFPQL AAAPIEQTEQ LEQLRAMWHG ERIAVLTTDD
APAAGVDTSE DLARVRAAWA ELLAQDGP
|
|---|
| |