Gene Rpic12D_2392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2392 
Symbol 
ID8020056 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2514034 
End bp2514804 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content68% 
IMG OID644831174 
Producttranscriptional regulator, IclR family 
Protein accessionYP_002982337 
Protein GI241663977 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAGC CGGGCCTGGC ACCTTCTCCA GCACAATCCG CCGCCGCGAC GGGCGGTTCG 
GACCGTGTGC TGATGGTGCT CGCCACCATC GCGCGCCACG GCCGCCCGGT TGCGGCGCGC
GAGCTGGTCG AACTGACCGG CCTGCCGCAA AGCACGCTGT ACCGCCAGGT GGCGATGCTC
AAGCGCTGGG GCTTCGTGCT GGAATCGGCC GGCACCTATG CCCCGGGGCC GATCAGCTTG
CAGCTCGCAC TCGGTTTCGA CCACGCTTCG CATCTGGTGC AGGAAGCGCG CATTGGCATG
GCCAAACTCG AGGTCGAGTC GGGCGAATCG GTGGGGCTGG TCGTGGCCGT GAAGGATCAG
GCCGTCTGCC TCGAGATGGT CGAGAGCCAG CAGTCGCTGC GCTGCTCGTT TGAGAAAGGG
CGCGGTGTGC CGCTGCTGGC CGGCGCGTCT GCCAAGTCAT TGCTCGCGTT CATGCCGCCC
GCTGCGGCGC GCGCCATCCT TGCCGATCTG CTGGCCATCG ATGCCGACAC CCAGGCGCAA
CTGCAAGCTG AACTCTCCGA CATTCGCGCC GCGGGCTATG CGCTGTCCGA AGGGGAGGTC
GACCCGGGCG TCTGGGGCGT GAGCGTGCCG GTGTTCCGGC TGCCCGGCCA CGCGCTCGGC
TCCATTACGT TGATGGCGCC TGCAACGCGC GTGCGCGGCA AGGAGCAGCG CCTGATCGAC
ATGACCGTTG CAGCGGCCGC GTCCATATCT GCGCGATTGC AGGACCTCTG A
 
Protein sequence
MTEPGLAPSP AQSAAATGGS DRVLMVLATI ARHGRPVAAR ELVELTGLPQ STLYRQVAML 
KRWGFVLESA GTYAPGPISL QLALGFDHAS HLVQEARIGM AKLEVESGES VGLVVAVKDQ
AVCLEMVESQ QSLRCSFEKG RGVPLLAGAS AKSLLAFMPP AAARAILADL LAIDADTQAQ
LQAELSDIRA AGYALSEGEV DPGVWGVSVP VFRLPGHALG SITLMAPATR VRGKEQRLID
MTVAAAASIS ARLQDL