| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2308 |
|---|
| Symbol | |
|---|
| ID | 8019972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 2428857 |
|---|
| End bp | 2429294 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644831091 |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_002982254 |
|---|
| Protein GI | 241663894 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.511627 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.000000675191 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCC CCGCACGCCC TTTGTCCAAG CAGGATTTCG AGAACCTCTC CGATTTCCGC
TACCACCTGC GTCGCTTCCT GCGCGCCTCC GAAGATCTGA TCCACGCCAA GGGCATTACG
CCCCTGCAGT ATCAGTTGCT GCTGCACGTG AAAGGCTATG CCGGGCGCGA ATGGGCCACC
GTCGGCGAAC TGGCCGAGCG CCTGCAGGCC GCGCCGCACG GCACAGCGGC ACTCATCACG
CGCTGCGAAG AAGCGGGTCT GGTCGAAAGG CGCCAGAGCG ACACCGACGC ACGCCAGGTC
GAAGTCCATC TCTCCAGGAA GGGCGACCAC CTCGTCGCAC TGCTGGCCGG GCTGCACCAG
AGCGAGCTGT CGGCCTTCAG CCGCGCTTTC AAGCTTCCGC ACCTCGATCA ACCCACCGAA
CCAGCCGCCG AGCAGTAA
|
|---|
| Protein sequence | MSTPARPLSK QDFENLSDFR YHLRRFLRAS EDLIHAKGIT PLQYQLLLHV KGYAGREWAT
VGELAERLQA APHGTAALIT RCEEAGLVER RQSDTDARQV EVHLSRKGDH LVALLAGLHQ
SELSAFSRAF KLPHLDQPTE PAAEQ
|
|---|
| |