Gene Rpic12D_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2294 
Symbol 
ID8019958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2418290 
End bp2419345 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content63% 
IMG OID644831077 
Producthypothetical protein 
Protein accessionYP_002982240 
Protein GI241663880 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.105061 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000015737 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGAGCACTG CTATTGCCAC GCGCAGCGAG TTCGGCGCGC AAACCACTAC CACCGCAGTC 
GTCGAAACGA CGTCGACCGC CGTTGCCGCG CAGGCCAAGG CGATGGTCGA GGCGCGCTAC
GTGATGGCGA TGCAGCGGCC CCGCAACTGG GACCAGGTCC GTCAAGACCT GCTTGCCGAG
TGCCGCCGGC CGTCCTTCGC GCACAACAAG AGCGCCTACT ACCGCAAGCC GATCGGCAAC
GGCGTCGAAG GTCTGGGCAT CCGCTTCGTC GAGGTGGCGT TGCGCTGCAT GAAGAACGTG
CTCGTCGAGA CGTCGATGAT CTTTGAGGAC GAGAGCAAGG AAATCCACCG CGTCAGCGTG
ACCGATCTGG AATCGAACGT CACCTATCCG CTGGACGTGC GCGTCTCCAA GACCGTCGAG
CGTGCCAAGC CGATGGATGA CGGCTCGTAC ATCTCCGTAC GCAAAAACAG CTACGGCAAG
ATGACCTACA CCGTGCCGGC CAACGACGAT GACCTGCTGA ACAAGCGCGC GGCGCAGATC
AGCAAGGCGA TTCGCACGCT TGGCTTGCGC ATCGTGCCTG GCGACCTGCA GGACGAGGCC
GAGGAAATCA TCAAGGCAGT GCGCATGGAC GAAGCCGCGC GCGATCCTGG CGCCGAGCGC
AAGCGCATTG CCGATGCATT CGCAGAAATC GGCGTCAAGG CCGCCGAACT GACAGCCTAT
CTTGGCCACC CGCTCGACAC GTGCTCGCCG CCCGAGCTGG TCGACCTGCG CGGCATCTAC
GGCGCGATCA AAGACGGCGA GGCCACCTGG AAGAGCGTCA TGGACAACAA GGCCGAGCAA
GCCGGAGGCG GCGACGGCGC GGGCGCCGAT GGCAAACAGC GTCCGGCATG CAAGCCCGAA
TCCTTCGAAA AGAAGAAGGC AGGCTGGCAG AAGCAAATCG AGAGCGGCGC AAAAACGCCG
AACGAACTGA TCGCCATGAT CGAAACCCGC GAAACCCTGA ACGACGAACA GAAGATGGAA
ATCGCGTCGT GGGTCGCAAA GCCGGAGGGC CAATAA
 
Protein sequence
MSTAIATRSE FGAQTTTTAV VETTSTAVAA QAKAMVEARY VMAMQRPRNW DQVRQDLLAE 
CRRPSFAHNK SAYYRKPIGN GVEGLGIRFV EVALRCMKNV LVETSMIFED ESKEIHRVSV
TDLESNVTYP LDVRVSKTVE RAKPMDDGSY ISVRKNSYGK MTYTVPANDD DLLNKRAAQI
SKAIRTLGLR IVPGDLQDEA EEIIKAVRMD EAARDPGAER KRIADAFAEI GVKAAELTAY
LGHPLDTCSP PELVDLRGIY GAIKDGEATW KSVMDNKAEQ AGGGDGAGAD GKQRPACKPE
SFEKKKAGWQ KQIESGAKTP NELIAMIETR ETLNDEQKME IASWVAKPEG Q