| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2216 |
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| Symbol | |
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| ID | 8019879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2361678 |
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| End bp | 2363351 |
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| Gene Length | 1674 bp |
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| Protein Length | 557 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830998 |
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| Product | dihydroxy-acid dehydratase |
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| Protein accession | YP_002982162 |
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| Protein GI | 241663802 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR00110] dihydroxy-acid dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGACA ACAAGCGTTC GCAACACATC ACCCAGGGCG TGGCGCGCTC GCCCAATCGC
TCGATGTTCT ACGCGCTGGG CTACACGAAA GACGACTTCA ACAATCCGAT GATTGGCGTG
GCCAACGGCC ATTCGACCAT CACACCGTGC AATTCGGGGC TGCAGAAGCT GGCCGATGCC
GCCGTGGCTG CAATAAGGGA CGCCCGCGCG AATCCGCAGA TCTTCGGTAC GCCCACCATT
TCCGACGGCA TGTCGATGGG CACGGAGGGC ATGAAGTTCT CGCTGATCTC GCGCGAAGTG
ATTGCCGACT GCATCGAGAC CTGCGTCAAC GGCCAATGGA TGGACGGGGT GGTCGTCATC
GGCGGCTGCG ACAAGAACAT GCCGGGCGGC ATGATCGCCC TGGCGCGCAC CAATGTGCCG
GGCATCTATG TGTACGGCGG CACCATCAAG CCGGGGCACT GGAAGGGCAA GGATTTGACC
ATCGTCTCGT CGTTCGAGGC CGTGGGCGAA TTCACCGCCG GCCGCATGAG CGAAGAAGAC
TTCGAGGGCA TCGAGAAAAA CGCCTGCCCC TCGAGCGGTT CGTGCGGTGG CATGTACACG
GCCAACACGA TGAGTTCGTC GTTTGAAGCG CTGGGCATGT CGTTGCTGTA TTCATCGACG
ATGGCTAATC CCGATCAGGA GAAGGTCGAC AGCGCCGCCG AATCCGCGCG CGTGCTTGTT
GATGCCGTGC GCCGCGACCT GAAGCCGCGC GACATCATCA CGCGCAAGTC CATCGAGAAC
GCCGTGGCCG TGATCATGGC CACCGGCGGC TCCACCAACG CCGTGCTTCA CTACCTGGCC
ATCGCCCACG CGGCAGAAGT GGAATGGACC ATCGATGACT TCGAGCGGGT CCGCCAACGC
GTGCCCGTCA TCTGCAACCT CAAGCCGTCG GGCCAGTATG TGGCCACCGA CCTGCACGAG
GCCGGCGGCA TCCCGCAGGT GATGAAGCTG CTGCTCAATG CCGGCCTGCT GCATGGGGAT
TGCATCACCA TCACCGGCAA GTCGCTGGCT GAAGAACTCG CGCACGTCCC TGACCAACCG
CGCGCCGATC AGAACGTGAT CCTGCCGATC GACAAGGCGC TCTACCAGGA AGGCCACCTC
GCCATCCTGA AAGGCAACCT GGCCGAGGAA GGCGCCGTGG CGAAGATCAC CGGCCTGAAG
AACCCGGTCA TCACCGGCCC GGCGCGCGTG TTCGAGGACG AGCAAAGTGC GATGAGCGCG
ATCCTGGGCG ACCAGATCAA GGCTGGCGAC ATCCTCGTAC TGCGCTATCT CGGGCCGAAG
GGCGGCCCCG GCATGCCGGA GATGCTGGCC CCGACCTCGG CCATCATCGG CAAAGGCCTG
GGCGAGTCAG TCGGCTTCAT TACCGACGGA CGCTTCTCGG GCGGTACGTG GGGCATGGTG
GTCGGCCACG TCGCACCGGA AGCCTACGTG GGAGGCACGA TTGGATTGGT GCACGAAGGG
GATTCGATCA CCATCGACGC GCACCAGCGG CTGCTGCAGT TGAACGTGCC GGACGACGTG
CTTGCCCGCC GCCGCGCCGC GTGGAAGCAA CCGGCGCCGC GCTATACGCG TGGCGTGCTG
GCGAAGTTTG CAAAACTGGC GGCAACGGCC AGCAAGGGCG CGGTAACGGA TTGA
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| Protein sequence | MPDNKRSQHI TQGVARSPNR SMFYALGYTK DDFNNPMIGV ANGHSTITPC NSGLQKLADA
AVAAIRDARA NPQIFGTPTI SDGMSMGTEG MKFSLISREV IADCIETCVN GQWMDGVVVI
GGCDKNMPGG MIALARTNVP GIYVYGGTIK PGHWKGKDLT IVSSFEAVGE FTAGRMSEED
FEGIEKNACP SSGSCGGMYT ANTMSSSFEA LGMSLLYSST MANPDQEKVD SAAESARVLV
DAVRRDLKPR DIITRKSIEN AVAVIMATGG STNAVLHYLA IAHAAEVEWT IDDFERVRQR
VPVICNLKPS GQYVATDLHE AGGIPQVMKL LLNAGLLHGD CITITGKSLA EELAHVPDQP
RADQNVILPI DKALYQEGHL AILKGNLAEE GAVAKITGLK NPVITGPARV FEDEQSAMSA
ILGDQIKAGD ILVLRYLGPK GGPGMPEMLA PTSAIIGKGL GESVGFITDG RFSGGTWGMV
VGHVAPEAYV GGTIGLVHEG DSITIDAHQR LLQLNVPDDV LARRRAAWKQ PAPRYTRGVL
AKFAKLAATA SKGAVTD
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