Gene Rpic12D_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2186 
Symbol 
ID8019848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2329390 
End bp2329950 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content67% 
IMG OID644830968 
Productproline rich protein 
Protein accessionYP_002982132 
Protein GI241663772 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.242882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.201232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACG AAACCTTCCT CTCGCGCTGG TCGCGCCGCA AGGCCGCCGA ACGGCGGGGC 
GAGCCCGAAC CGGAAGCGGC ACCGCCCGCC GAGCCGGCCC CCGTCGTTGT GCCTGAAGCG
TCGACGGCCG AGCCTACGCC CGAAGCGGCA CCCCCGCTCA CTCTGGAAGA CGCCTCCAAG
TTGACGCCAT CCGATGATTT CTCGCCCTTC GTCGCGCACG GGGTGGACGA AGCCGTCAAG
CGTGCCGCGC TCAAGAAGCT CTTCGCCGAT CCGCACTTCA ATGTGATGGA CGGGCTCGAT
ACCTACATCG ACGACTATTC GCAGCCCGAC CCGATCCCGC CCGAGATGTT GCGCGAGCTG
CGGCACACGG CGGAATTGCG GTTGTTCGAG CCGCTGGACG AGGATGTGGC TGCGCCGCCA
GGAATCGAAC CGGTATCGGC CGCTGCAACT CTGGTCACGG GCGAGATGCC GCCTGAACCT
GCCGATGCCG AGTCGCCCCG CGTTGATGAC CCGGCGCAGG CAACCCCGCA TGGCGGCGTT
AAGCCGCCGT CCGTAGAATA A
 
Protein sequence
MSDETFLSRW SRRKAAERRG EPEPEAAPPA EPAPVVVPEA STAEPTPEAA PPLTLEDASK 
LTPSDDFSPF VAHGVDEAVK RAALKKLFAD PHFNVMDGLD TYIDDYSQPD PIPPEMLREL
RHTAELRLFE PLDEDVAAPP GIEPVSAAAT LVTGEMPPEP ADAESPRVDD PAQATPHGGV
KPPSVE