Gene Rpic12D_2159 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2159 
Symbol 
ID8019821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2295759 
End bp2296991 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content65% 
IMG OID644830941 
Productprotein of unknown function DUF482 
Protein accessionYP_002982105 
Protein GI241663745 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.296465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTCTC GCCCCCTTGC TCCCGAGCCT CAAGCGCGCG CTGGTTCGCG ACACGAATTG 
GCCGATTATC GCACGCGACT TGTGACCGAT CTGCGTGACA TCGGCCGCGA TGCCTGGGAC
GCCCTGCTCG CCCTGCAGCC CGAGGCAACG CCTTTTCTGC GCTTCGATTT CCTGCACGCC
CTGCATGCGA GCGGCAGCGC GTCGCCCGAC ACCGGCTGGT CGCCGCAATA CCTGACGCTG
TGGCAAGACG GCCCCGACGG CGAAGTGCTC GCTGCAGCCG TACCGCTGTA CGTGAAAGGC
CACTCCTATG GCGAGTACGT CTTCGACTGG GCGTGGGCCA ATGCGTATGC GCAGCACGGG
CTGGAGTACT ACCCAAAATG GCTGTCGGCC GTGCCGTTTA CGCCGGTGCA GGGTGCTCGG
TTGCTGGCGC GGGAAGCGGC TGCGCGCGCA GCGCTGGTCG AAACGTTGCT GGCAGTGGCG
CGCCAGAGCG CGTTGTCATC GCTGCATGTG CTGTTTCCCA CTGCCGGTGA AGCCGAGCAA
CTGCGCAGCG CCGGCATGCT GCTGCGGCAC GGCGTGCAGT TCCACTGGTG CAATCCGGGC
TTCGCCAGCT TCGACGACTT CCTGGCCGCG CTGGAACAGA AGAAGCGCAA GAATATCCGC
GCGGAGCGTC GCCGCGTGCA TGAGGCCGGC ATCACCTTCC GTCACGTCCC CGGCGCAGCC
GCCACGGACG CCGACTGGCG CTTCTTCCAC CGGTGCTATC GCACCACTTA CCGCGAGCAT
CACTCGTCGC CGTATCTGAA CCTGGAGTTC TTCCGCCAGA TCGCTCGGAC GATGCCGGAA
AACCTGCTCC TGGTGATCGC CTCGCGTGAT GGCAATGACA TCGCCAGCGC GCTGCTGGTG
ATCGACATGC GCCCCGAGGC GTCCGTCATG TACGGCCGCT ACTGGGGTGC GGTGGAACAT
CACCCCTGCC TGCACTTTGA GACGGCGTAT TACCAACCGC TGACGTACTG CATCGCGCAC
GGCATCCGCA CGTTCGAAGG TGGTGCGCAA GGCGAACACA AGATGGCACG CGGCTTCGAG
CCCGTGGCGA CGCTGTCGGC ACACTGGCTG GCGCACCCCG CATTTGCCGA TGCTGTGGGC
AGGTTCCTCG ACCGCGAAAC GGCCGGCATG GAAGCGTATC TGGACGAGTT GACGGACCGC
TCACCGTTCA GGCAGCGGCA AGAATCGGAT TAG
 
Protein sequence
MTSRPLAPEP QARAGSRHEL ADYRTRLVTD LRDIGRDAWD ALLALQPEAT PFLRFDFLHA 
LHASGSASPD TGWSPQYLTL WQDGPDGEVL AAAVPLYVKG HSYGEYVFDW AWANAYAQHG
LEYYPKWLSA VPFTPVQGAR LLAREAAARA ALVETLLAVA RQSALSSLHV LFPTAGEAEQ
LRSAGMLLRH GVQFHWCNPG FASFDDFLAA LEQKKRKNIR AERRRVHEAG ITFRHVPGAA
ATDADWRFFH RCYRTTYREH HSSPYLNLEF FRQIARTMPE NLLLVIASRD GNDIASALLV
IDMRPEASVM YGRYWGAVEH HPCLHFETAY YQPLTYCIAH GIRTFEGGAQ GEHKMARGFE
PVATLSAHWL AHPAFADAVG RFLDRETAGM EAYLDELTDR SPFRQRQESD