Gene Rpic12D_2126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_2126 
Symbol 
ID8019787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2267836 
End bp2268459 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content62% 
IMG OID644830907 
Productcytochrome C oxidase mono-heme subunit/FixO 
Protein accessionYP_002982072 
Protein GI241663712 
COG category[C] Energy production and conversion 
COG ID[COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit 
TIGRFAM ID[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.239772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAAGCG TCACCTTCCT GATCGCTTCG GGGATGTTCA TGCTGGCGCT GGCGACCAGT 
GCATTGGTGG TGCTACCTTT TTTGCAGCTG CATGAACTGA AGCCTCTCCC GGGACTCAAG
CCGTACACCG CAGCAGAACT GCGTGGGCGT CAGGTCTATA TCAGCAACGG CTGCATCTAC
TGCCATTCGC AGCAACCTCG GGATGCCGCT TTTGCACCCG ACGCCAAGCG TGGCTGGGGT
CGGGCGTCGG TGGCGGCAGA CTACTACTAC GATCACCCGC ATCTGCTCGG CACGATGCGC
ACGGGCCCCG ATCTTTTCAA CATCGGCGCA CGCCAGCCCA GCGCGGACTG GCACCTCGGA
CACCTGTACC AGCCGCGGGC CTACGTCGCG CAGAGCATCA TGCCGAGCTA CCCATTTCTG
TTCGACGTGA AAGACGCAGC TGACCAGGGA GACCGCGTAG TGACGCTGCC TCCGGGCGCG
GCCCCGGCCG GCAAGGTTGT CGTCGCGACA CCCGATGCGC TTGATCTTGT CGCGTACCTG
AAGTCGCTCG ACCATACGTA TGCTGCAATT GCCGCGCCGG ATGGTGAAGC CAGCAAGGCT
GCCAAGCCTG TCGCTGCCAA CTAG
 
Protein sequence
MRSVTFLIAS GMFMLALATS ALVVLPFLQL HELKPLPGLK PYTAAELRGR QVYISNGCIY 
CHSQQPRDAA FAPDAKRGWG RASVAADYYY DHPHLLGTMR TGPDLFNIGA RQPSADWHLG
HLYQPRAYVA QSIMPSYPFL FDVKDAADQG DRVVTLPPGA APAGKVVVAT PDALDLVAYL
KSLDHTYAAI AAPDGEASKA AKPVAAN