Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_2126 |
Symbol | |
ID | 8019787 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2267836 |
End bp | 2268459 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644830907 |
Product | cytochrome C oxidase mono-heme subunit/FixO |
Protein accession | YP_002982072 |
Protein GI | 241663712 |
COG category | [C] Energy production and conversion |
COG ID | [COG2993] Cbb3-type cytochrome oxidase, cytochrome c subunit |
TIGRFAM ID | [TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.239772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAAGCG TCACCTTCCT GATCGCTTCG GGGATGTTCA TGCTGGCGCT GGCGACCAGT GCATTGGTGG TGCTACCTTT TTTGCAGCTG CATGAACTGA AGCCTCTCCC GGGACTCAAG CCGTACACCG CAGCAGAACT GCGTGGGCGT CAGGTCTATA TCAGCAACGG CTGCATCTAC TGCCATTCGC AGCAACCTCG GGATGCCGCT TTTGCACCCG ACGCCAAGCG TGGCTGGGGT CGGGCGTCGG TGGCGGCAGA CTACTACTAC GATCACCCGC ATCTGCTCGG CACGATGCGC ACGGGCCCCG ATCTTTTCAA CATCGGCGCA CGCCAGCCCA GCGCGGACTG GCACCTCGGA CACCTGTACC AGCCGCGGGC CTACGTCGCG CAGAGCATCA TGCCGAGCTA CCCATTTCTG TTCGACGTGA AAGACGCAGC TGACCAGGGA GACCGCGTAG TGACGCTGCC TCCGGGCGCG GCCCCGGCCG GCAAGGTTGT CGTCGCGACA CCCGATGCGC TTGATCTTGT CGCGTACCTG AAGTCGCTCG ACCATACGTA TGCTGCAATT GCCGCGCCGG ATGGTGAAGC CAGCAAGGCT GCCAAGCCTG TCGCTGCCAA CTAG
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Protein sequence | MRSVTFLIAS GMFMLALATS ALVVLPFLQL HELKPLPGLK PYTAAELRGR QVYISNGCIY CHSQQPRDAA FAPDAKRGWG RASVAADYYY DHPHLLGTMR TGPDLFNIGA RQPSADWHLG HLYQPRAYVA QSIMPSYPFL FDVKDAADQG DRVVTLPPGA APAGKVVVAT PDALDLVAYL KSLDHTYAAI AAPDGEASKA AKPVAAN
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