| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_2053 |
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| Symbol | |
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| ID | 8019714 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 2190439 |
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| End bp | 2191545 |
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| Gene Length | 1107 bp |
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| Protein Length | 368 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644830839 |
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| Product | TM1410 hypothetical-related protein |
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| Protein accession | YP_002982004 |
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| Protein GI | 241663644 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2342] Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase |
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| TIGRFAM ID | [TIGR01370] possible cysteinyl-tRNA synthetase, Methanococcus type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.514202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCTGA TCTCTCCGAT TGCCCTGGTG TGTGCCGGGC TGATGCTGTC TGCCTGCGGT
GGCGACGGTG GTTCGTCGTT GAGCCCGCAA GCCGGGGGAG TTCCCAATGC GGCGAATGCC
GGGGCAAAAA CCATGGCTGC AGCCACCGCA GACGCCACAC CGGCTTGCGG AGCCAACGGC
ACCTCGCCAC TGGCAGGCGT GCAGACGTGG ATGTATCAAC TGCAGGGCAT GACCACCAGC
GCGCAGATCG ATGCACTCGA CGCGCAGCCA TACGACATGA TGGTGATCGA AGCCAACAAC
ACCGTCAAAG GTTTGGAGGA CTTCAACACC GTCGACATGG TGGCGCGCCT GCGCACCAAG
CCTGACGGCT CGACGCGCAA GGTGCTCGCC TACATCGACA TTGGCGAAGC CGAAGACTTC
CGCACCTATT GGACATCAAG CTGGAAGGCG CCCACAGCGA ACGGACCAGG CACACCAGAC
TTCATCATCA AGGCCGACCC CGATGGCTGG GCCGGCGACT ACCCCGTCGC GTTCTGGGAC
CCCCGCTGGC AAGCGCTCTG GCTTGGGCCG AACGGCGCCG TCGCACAACT GGCGCGCGAG
GGGTTCGATG GCGTCTATCT GGATTGGGTC GAGGCGTACG CCGAGCCTTC TGTGGCGGCC
GCAGCCCAGG TAGCAGGCAT CGATCCGGCC CAGGCCATGG TCGATTTCAT CGCCAAGATC
CGAGCGGCGG GTCGCGCCAT CAACCCGCAG TTTGCAGTGA TCCAGCAGAA CGCATCCTCG
TTGTTTGACG ACGGTGGTGG ATCAACGCTG CTGGCAACGA TCGATGGCAT CTCGCAGGAA
GACACATGGT TTGGCGGCAG CTCGGGCGCC GCGTGGGGCA GCGCCTCCGG CGGCGACAGG
GCAGCGAGTG CCGATGACAC GCAATGGACC ATCGACCAGT TGCAGAAATA CTGCGCCGGC
AACGTGCCTG TCTTTACGAT CGACTATGCG TTGCAGACCG CCAACGCGCA GAAGGTCTAC
ACGGCGTCGC GCCGGCAAGG CTTTCACCCG CTGGTCTCCC GCATCGCGCT GTCCAAGCCG
ACCACTACGC CGCCCTGGAA TTACTGA
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| Protein sequence | MRLISPIALV CAGLMLSACG GDGGSSLSPQ AGGVPNAANA GAKTMAAATA DATPACGANG
TSPLAGVQTW MYQLQGMTTS AQIDALDAQP YDMMVIEANN TVKGLEDFNT VDMVARLRTK
PDGSTRKVLA YIDIGEAEDF RTYWTSSWKA PTANGPGTPD FIIKADPDGW AGDYPVAFWD
PRWQALWLGP NGAVAQLARE GFDGVYLDWV EAYAEPSVAA AAQVAGIDPA QAMVDFIAKI
RAAGRAINPQ FAVIQQNASS LFDDGGGSTL LATIDGISQE DTWFGGSSGA AWGSASGGDR
AASADDTQWT IDQLQKYCAG NVPVFTIDYA LQTANAQKVY TASRRQGFHP LVSRIALSKP
TTTPPWNY
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