Gene Rpic12D_1997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1997 
Symbol 
ID8019657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp2121692 
End bp2122639 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content66% 
IMG OID644830783 
Product2-dehydropantoate 2-reductase 
Protein accessionYP_002981949 
Protein GI241663589 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1893] Ketopantoate reductase 
TIGRFAM ID[TIGR00745] 2-dehydropantoate 2-reductase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.515886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGATGA AGATCGCCAT TCTTGGGGCG GGTGCGATGG GCTCGCTGTT TGGCGGGTTG 
CTGGCCGAAG CCGACCAGCA TGTCACGCTG CTCGATATCA ACGATGCACA TCTGCACGCC
ATCGCCGCGC GCGGTTTGCG GCTGGAAACC GATTGGGGCG ACCGTCATGT CGGCAACCTG
CAGGCGCTGC GTCCGGGCGA TGCGGCCGAC GTGCCGGACT TGCTGATCGT CTTCACCAAG
TCCATGCACA CACGCGCCGC AGTGGCGAGC GTGCGTCATC TGATTGGCCC AGCGACACAT
GTACTGACGC TGCAGAACGG GCTGGGCAAT GTGGAGGCGC TGGCTTCGAT GGTGCAGCGA
GAGCGCATCT TTGTTGGCGT CACGACGTGG CCGGCAGATT TGGTTGGCCC GGGCCACGTG
CGCTCACATG GCACGGGCGA GATCCGCCTG ATGAGCGCTG ACGGCGAGCG GCCCGCGATA
CTCGCACGCG TGGTGCATGT GCTGTCCGCA GCAGGCCTGA ACTGCCAGGC CGATGCCAAC
GTGTGGGGCG CCGTGTGGGA GAAAGTCGCT TTCAATGCCG CACTCAACCC GCTGTGTACG
GTGCTGAACC AGCCCGTCGA TGCGCTGGGG GCGGTAGAAG ACGGCCCGGC GCTGGCGCTG
ACCATCGTAG ATGAAGTGCT GGCCGTGGCG CGCGCCAGCG GCATTACGGT TGATGCCGGA
AAGGTGAACG ACAACGTACG GCACGCCATC GTCGCGCATC GCGGGCACAA GCCATCGATG
CTGCAGGACG TGCTGGCCGG TCGCCTGACC GAGATCGAAT CCATCAATGG CGCCGTGGTA
GCGACGGCGC GCCGGCATGG CGTGCCCGTG CCGCACACCG AGACCTTGAT GCAGCTCGTG
CGGTTGGTGC AGGTACAGGC GCAGGCGGCA CACCAGCAGG AGCGTTAG
 
Protein sequence
MPMKIAILGA GAMGSLFGGL LAEADQHVTL LDINDAHLHA IAARGLRLET DWGDRHVGNL 
QALRPGDAAD VPDLLIVFTK SMHTRAAVAS VRHLIGPATH VLTLQNGLGN VEALASMVQR
ERIFVGVTTW PADLVGPGHV RSHGTGEIRL MSADGERPAI LARVVHVLSA AGLNCQADAN
VWGAVWEKVA FNAALNPLCT VLNQPVDALG AVEDGPALAL TIVDEVLAVA RASGITVDAG
KVNDNVRHAI VAHRGHKPSM LQDVLAGRLT EIESINGAVV ATARRHGVPV PHTETLMQLV
RLVQVQAQAA HQQER