Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1942 |
Symbol | pepN |
ID | 8019599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 2067351 |
End bp | 2070053 |
Gene Length | 2703 bp |
Protein Length | 900 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644830726 |
Product | aminopeptidase N |
Protein accession | YP_002981895 |
Protein GI | 241663535 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | [TIGR02414] aminopeptidase N, Escherichia coli type |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0574258 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTGCGCA CCGATACCGC CGTCACGATT TACCGCAAGG ACTACACCGC GCCCGCTTTC CGCATTGACG AAGTGGCCCT GGAGATCGAT CTCGTGCCCG AGCGCACCCG TGTCGTCAAC CGCATGCGCC TGACGCGCAC GGATGCCGGC AAGCCGCTCG TGCTGGCAGG TGAAGGGCTG GAGCTGGCGG GCGCAACAGT CGACGGCAAG GCGCTGTCCG GCCTGCAGGC TTCCGGCGAC ACACTCACCA TCGAAGCCGT ACCGGCCGAT GTTGGCGCCA GCTTTACGCT GGAACTCACC ACGTACTGCA ATCCCGCCGC GAACTCGTCG CTGATGGGCC TGTACGTTTC CAACGGCAAC TTCTTCACAC AGTGCGAGGC CGAGGGCTTC CGCAAGATCA CCTACTTCCT CGACCGCCCG GACGTGATGA CCGTCTACAC CGTCACGCTG CGCGCATCGA AAGCGGATTA CCCGGTGCTG CTGTCCAACG GCAATCTCGT GTCGGAGCGC GACCTGCCGG ACGGCCGCCA CGAAGCCGTG TGGCACGACC CGTTCAAGAA ACCGTCGTAC CTGTTCGCGC TGGTGGCAGG CAAACTCGAG TGCATCGAGG AGCGCATTCA ATCCGCATCG GGCAAGGAGA AGCTGCTGCA GGTATGGGTC GAGCCGCATG ACCTGGGCAA GACGCGCCAC GCAATGGATT CGCTGATCCA CTCCATCCAC TGGGACGAAC GCCGCTTTGG CCTCGAGCTG GATCTGGACC GCTTCATGAT CGTCGCCGTG GGCGACTTCA ACATGGGCGC GATGGAAAAC AAGGGCCTGA ACATCTTCAA CACGAAGTAC GTGCTGGCCA ACGCCGAGAC GGCCACCGAT GTGGATTTCG CCAACATCGA ATCGGTGGTC GGCCACGAAT ACTTCCACAA CTGGACGGGC AACCGCGTCA CTTGCCGCGA CTGGTTCCAG TTGAGTCTGA AGGAAGGCCT GACGGTGTTC CGCGATCAGG AGTTCTCCGC TGACATGGCC GCGCTGGCCG GCAACGAATC CGCCGCTGCC AGCGCACGCG CCGTCAAGCG CATCGAAGAC GTGCGGCTGC TCCGCCAGGC GCAGTTCCCT GAAGACGCTG GCCCGATGGC CCACCCGGTA CGGCCCGACA GTTACGAAGA AATCAACAAC TTCTACACCG TCACGGTGTA CGAAAAAGGC GCCGAAGTCG TGCGCATGTA CCAGACGCTG CTGGGCCGCG ACGGTTTCCG CAAGGGCATG GACCTGTACT TCCAGCGCCA CGATGGGCAC GCCGTCACCT GCGACGATTT CCGCGCCGCC ATGGCCGATG CCAACGGCCG CGACCTCACG CAATTCGGCC GCTGGTACAG CCAGGCCGGC ACGCCAGTCG TGGCAGTCGA AGGCCACCAC GATGCCGCCA CGCACACGTA CACGCTCACG CTGCGCCAGC GCTGTGAGCC GGTCGGCATT GAAGTGAACA GCGGCATCCA GAAGCAACCG TTCCACATTC CGTTTGCGAT CGGCCTGATC GACAAGAACG GCCGCGACTT GCCTCTGCGC TTGCGTGGCG AGCCCGCATC GCCCTCGCCC GTGACCACAC GCGTGCTGGA CTTCACGGAA ACCAAGCAGA CCTTCGTCTT CGAAGATGTG GCCGAAGCGC CGTTGCCCTC GCTGTTGCGC AATTTCTCGG CGCCGGTGAT CGTGGAATAC AGCTATACGA CCGAGCAGCT TACGTTCCAG CTCGCGCACG ACTCCGACCC GTTCAACCGC TGGGAGGCCG GCCAACGCCT GGCCACGGAC ACACTGCTGC GCATGGTGAC GGACATCCAG CACGGCCGCG CGCCGCTGGT GGATCCGGCG CTGGTCGAAG CCCTGCGTGC CGTGGTCGCC GACACCTCGC TCGATCCGGC CTTCCGCGAG CAGATGCTGA TCCTGCCCGC CGAAAGTTAC CTGGCCGAAC GCATGGACGT GGCCGACCCG GCTTCCATTC ACACCGCCCG CCGCACGCTG CGCCGCACGC TCGCGGAGAA GCTCAACGCA GAGTTGCTGC GCGCCTATCA GGACAACCAA ACCGAGGGGC CCTACTCGCC AGATGCGGTG TCTGCAGGCA AGCGTGCGCT CAAGAACATC GCCCTCGGTT ATCTGGTGGA AACCGAAGCC CCTGAGGCGC TGGCCCTGGC CGAACGGCAA TATGCCGGCG CCACCAACAT GACCGACCGC ATGGGCGCCC TCTCCGCCAT GGTGAACAGC TACGCCCCTG GCCGCGAAGG GGCGCTGGCC GATTTCTACA CGAGATTTGC CGACGATGCC CTCGTCATCG ACAAGTGGTT CTCGCTGCAA GCCATGCAGC CGGGCGCCTT CGGCAAGCCA ACGCTGGAAA CCGTTCGAGC CCTGATGACT CATCCGGCCT TTACGCTGCG CAATCCGAAC CGCGCGCGCT CGCTGATCTT CAGCTTCTGC TCGGGCAACC CAGCGCAGTT CCACGCCGCC GATGGGTCGG GCTATGCGTT CTGGGCCGAG CAGGTGCTGG CGCTCGACGC CATCAACCCG CAGGTCTCTG CCCGCCTGGC ACGCGCGCTG GACCGCTGGC GCAAATACGT GCCGACGCTG CGCGACGCCA TGCAGGACGC GCTCAAGCGC GTGGCGGCAC ATCCGAGCCT CTCGCGCGAT GTGCGGGAGA TCGTCGGCAA GGCGCTGGCC TGA
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Protein sequence | MLRTDTAVTI YRKDYTAPAF RIDEVALEID LVPERTRVVN RMRLTRTDAG KPLVLAGEGL ELAGATVDGK ALSGLQASGD TLTIEAVPAD VGASFTLELT TYCNPAANSS LMGLYVSNGN FFTQCEAEGF RKITYFLDRP DVMTVYTVTL RASKADYPVL LSNGNLVSER DLPDGRHEAV WHDPFKKPSY LFALVAGKLE CIEERIQSAS GKEKLLQVWV EPHDLGKTRH AMDSLIHSIH WDERRFGLEL DLDRFMIVAV GDFNMGAMEN KGLNIFNTKY VLANAETATD VDFANIESVV GHEYFHNWTG NRVTCRDWFQ LSLKEGLTVF RDQEFSADMA ALAGNESAAA SARAVKRIED VRLLRQAQFP EDAGPMAHPV RPDSYEEINN FYTVTVYEKG AEVVRMYQTL LGRDGFRKGM DLYFQRHDGH AVTCDDFRAA MADANGRDLT QFGRWYSQAG TPVVAVEGHH DAATHTYTLT LRQRCEPVGI EVNSGIQKQP FHIPFAIGLI DKNGRDLPLR LRGEPASPSP VTTRVLDFTE TKQTFVFEDV AEAPLPSLLR NFSAPVIVEY SYTTEQLTFQ LAHDSDPFNR WEAGQRLATD TLLRMVTDIQ HGRAPLVDPA LVEALRAVVA DTSLDPAFRE QMLILPAESY LAERMDVADP ASIHTARRTL RRTLAEKLNA ELLRAYQDNQ TEGPYSPDAV SAGKRALKNI ALGYLVETEA PEALALAERQ YAGATNMTDR MGALSAMVNS YAPGREGALA DFYTRFADDA LVIDKWFSLQ AMQPGAFGKP TLETVRALMT HPAFTLRNPN RARSLIFSFC SGNPAQFHAA DGSGYAFWAE QVLALDAINP QVSARLARAL DRWRKYVPTL RDAMQDALKR VAAHPSLSRD VREIVGKALA
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