| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_1940 |
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| Symbol | |
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| ID | 8019597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 2063912 |
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| End bp | 2066233 |
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| Gene Length | 2322 bp |
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| Protein Length | 773 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644830724 |
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| Product | malic enzyme |
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| Protein accession | YP_002981893 |
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| Protein GI | 241663533 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0281] Malic enzyme |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.5551 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0188499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA AGCTTCACGA CGCCTCGCCG GACTCCCAAG ACCAAGGCGC CGAGGCCGAA
CTGCGCCGCG CGGCGTTTGA ATACCACCGC ACCCCCACGC GCGGCAAGAT CGAGGTTCGC
CCGACCAAGG CGCTGATCAA TCAGCGTGAT CTTTCGCTGG CGTATTCGCC GGGCGTGGCG
TATCCGTGTA CCGCGATCGA GCAAGACCCG TCGCTGGCGG CGGAGTACAC GTCGCGCGGC
AACCTGGTCG GCGTGATCAC CAACGGCACT GCGGTGCTGG GTCTGGGCGA CATCGGCCCG
CTGGCCAGCA AGCCCGTGAT GGAAGGCAAG GGCTGCCTGT TCAAAAAATT TGCCGGCGTG
GATGTGTTCG ATATCGAACT GGCCGAGCGC GATCCGGACA AGCTGGTCGA CATCATCGCC
TCGCTGGAGC CGACGCTGGG AGGGATCAAC CTGGAAGACA TCAAGGCGCC GGAGTGCTTC
TACATCGAGC AGAAGCTGCG TGACCGCCTG AACATTCCCG TCTTCCACGA TGACCAGCAC
GGCACGGCGA TCATCTCGTC GGCGGCGCTG CTCAACGGCC TGAAGGTCGT CGGCAAGGAC
ATCGGCAACG TGAAGGTGGC CGTGTCGGGC GCGGGCGCTG CGGCCATTGC CTGCCTGGAC
GTGATGGTCG GCCTGGGCGT CAAGCGCGAG AACGTCTACG TGGTCGATTC GAAGGGCGTG
ATCTACGCCG GCCGCGACGC CAAGATGGAG CCGAACAAGG CCCGTTATGC GCAGGACACG
TCGGCCCGTA CGCTGGCCGA CATCGTGCGC GATGCAGACG TGTTCCTCGG TTGCTCGGCC
GCCGGCGTGC TGACCGCCGA CATGGTCAAG ACCATGGCGC CGAAGCCGAT CATCCTGGCG
CTGGCCAATC CCGAGCCGGA AATCCGCCCG GAAATCGCCA AGGCCGCGCG CCCGGACTGC
ATCATCGCCA CGGGCCGTTC GGACTACCCG AACCAGGTCA ACAACGTGCT GTGCTTCCCG
TACATCTTCC GCGGTGCGCT CGATTGCGGC GCCACCAAGA TCACGGAAGA GATGAAGCTG
GCCTGCGTGA AAGCCATTGC CGAGCTGGCC GAAGCCGAAA CGAACGATGC CGTGGCGCAG
GCTTACGCCG GCCAGGACCT GACCTTCGGC CCGGATTACA TCATCCCGAA GCCGTTCGAT
TCGCGCCTGA TCGAGAAGAT CGCGCCGGCC GTCGCCAAGG CCGCAGAAGA GTCCGGTGTG
GCCACGCGCC CGATCAAGGA TCTGGACGCC TATCGCGCCC AGCTGAGCGA CTTCGTGTAC
CACACGGGCC TGACCATGCG GCCGGTGTTC TCGGCCGCCA AGGCCAACCC GAAGCGCGTC
GTGTACGCCG AAGGCGAAGA AGAGCGCGTG CTGCGCGCGG TGCAGACGGT GGTCGACGAA
GGCCTCGCCA AGCCGATCCT GATCGGCCGT CCGCACGTGA TCGAAATGCG CATCCAGAAG
GCCGGCCTGC GCCTGAAGCC CGGCGTGCAT TTCGAGCTGG TCGATCCGGA AGACGACCGC
CGCTATCACC AGTACCACAC CGCTTACCAC GAGCTGATGG GCCGCAACGG CGTGACGCCG
GACATGGCCA AGTCGGCGCT GCGCCGTTCG AACACGCTGA TCGGTGCACT GCTGGTGCGT
CTGGGCGATG CCGATGCGCT GCTGTGCGGC ACGGTTGGCC GCTTCGACGC CCACCTGGAA
CACGTGCGCG ACGTGATCGG CCTGGCCCCG AACGCCAAGG TGTTCGCCGC CATGAACGGC
CTGATGCTCG AGAAGCACAC GCTGTTCATC ACCGACACGT TCGTCAACGA AATGCCGAGC
GCAGAAGAGC TGGCCGACAT CACCAAGCTG GCGGCAGAAG AAGTGCGCCG TTTCGGCCAG
GAGCCGAAGG TCGCGATGCT GTCGCACTCG ATGTTCGGCT CGTCGAAGAA CGCGTCGGCC
CGCCGCATGC GCGCTGCGTA TGACCTGCTG AAGGTGGAAG CGCCCGACCT GCAGGTGGAA
GGCGAGATCC AGGGTGACGC AGCGTTGTCG GAAGACATCC GCCACCACTT CCTGCCCAAG
AGCGCGTTCT CGGGCAGCGC AAACCTGCTG GTGATGCCGT CGCTCGACGC CGCCAACATC
GCGTTCAACC TGCTCAAGAT CACGGGCGGG CAGGGCGTGA CGGTGGGCCC GATCCTGCTG
GGCGCGGCCA AGCCCGTGCA CATCCTGAAC CCGTCGGCAA CATCGCGCCG CATCGTCAAC
ATGACGGCGC TGGCGGTGGC GGACGTGTCG GCTACGCGTT GA
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| Protein sequence | MNDKLHDASP DSQDQGAEAE LRRAAFEYHR TPTRGKIEVR PTKALINQRD LSLAYSPGVA
YPCTAIEQDP SLAAEYTSRG NLVGVITNGT AVLGLGDIGP LASKPVMEGK GCLFKKFAGV
DVFDIELAER DPDKLVDIIA SLEPTLGGIN LEDIKAPECF YIEQKLRDRL NIPVFHDDQH
GTAIISSAAL LNGLKVVGKD IGNVKVAVSG AGAAAIACLD VMVGLGVKRE NVYVVDSKGV
IYAGRDAKME PNKARYAQDT SARTLADIVR DADVFLGCSA AGVLTADMVK TMAPKPIILA
LANPEPEIRP EIAKAARPDC IIATGRSDYP NQVNNVLCFP YIFRGALDCG ATKITEEMKL
ACVKAIAELA EAETNDAVAQ AYAGQDLTFG PDYIIPKPFD SRLIEKIAPA VAKAAEESGV
ATRPIKDLDA YRAQLSDFVY HTGLTMRPVF SAAKANPKRV VYAEGEEERV LRAVQTVVDE
GLAKPILIGR PHVIEMRIQK AGLRLKPGVH FELVDPEDDR RYHQYHTAYH ELMGRNGVTP
DMAKSALRRS NTLIGALLVR LGDADALLCG TVGRFDAHLE HVRDVIGLAP NAKVFAAMNG
LMLEKHTLFI TDTFVNEMPS AEELADITKL AAEEVRRFGQ EPKVAMLSHS MFGSSKNASA
RRMRAAYDLL KVEAPDLQVE GEIQGDAALS EDIRHHFLPK SAFSGSANLL VMPSLDAANI
AFNLLKITGG QGVTVGPILL GAAKPVHILN PSATSRRIVN MTALAVADVS ATR
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