Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1896 |
Symbol | |
ID | 8019553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 2012457 |
End bp | 2014631 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830680 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_002981849 |
Protein GI | 241663489 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.336767 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGT TCAATAAGGT CGTCAAAGAA TTCCAATGGG GCGGCCATAA GGTCCGCATG GAGACGGGTG AGATCGCCCG TCAGGCGAGC GGCGCTGTGC TGCTCGATAT GGACGACACC GTCGTGCTCG CCACCGTGGT GGGCGCCAAG AACCCGAAGC CGGGTCAGGA CTTCTTCCCG CTGACTGTCG ATTACCTCGA GAAGACCTAC GCCGCCGGCA AGATCCCGGG TGGCTTCTTC AAGCGCGAAG GCCGTCCGTC GGAAAACGAA ACGCTGACCT CGCGCCTGAT CGATCGCCCG CTGCGTCCGC TGTTCCCGGA AGGCTTCTAC AACGAAGTCC AGGTCGTGAT CCACGTGCTG TCGATGAACC CGGAAGTGCC GGCTGACATT CCGGCGCTGG TGGCGGCTTC GGCTGCGCTG GCTGTGTCGG GTCTGCCGTT CAACGGCCCG GTGGGCGCTG CCCGCGTGGG TTACAAGGAT GGCCAATACC TGCTGAACCC GAATCGTGCG CAACTCGCGC ACTCGGATCT GGACCTGGTT GTGGCCGGTA CCGAGCGTGC TGTGCTGATG GTCGAATCCG AAGCGCAGCA GCTGTCGGAA GAAGTCATGC TAGGCGCCGT GGTGTACGGC CACGAGCAGA TGCAGATCGC CATCAACGCG ATCCACGAAC TGGTGCGCGA CGGCGGTAAG CCCGAGTGGG ATTGGCAAGC TGCTCCGAAG AACGAAGCGC TGGTCGCCAA GGTGTCCGAG CTGGGCCTGG CCGATCTGCA AGCCGCTTAC CAACTGCGCC AGAAGTCGGC CCGCAGCCAG AAGCTGAAGG AAGTCTACAA GTCGGTTGCG ACCAAGCTGG CCGAAGCCGG TGTGGAAGCC GACGGCGTGG AAGTCGACAA CATCCTGTTC GAACTCGAAT CGAAGATCGT GCGCGGTCAG ATCCTGAACG GCGAACCGCG TATCGACGGC CGCGACACCC GCACGGTGCG CCCGATCGAG ATCCGTTCGT CGGTGCTGCC GCGTGCCCAC GGCTCGGCTC TGTTCACGCG CGGTGAAACG CAAGCGCTGG TGGTGGCCAC GCTCGGCACC AAGAGCGACG AGCAGATCAT CGACGCGCTG CAAGGCGAGT ACCGTGATCG CTTCATGCTC CACTACAACA TGCCGCCGTT CGCCACGGGC GAAACCGGTC GCGTGGGCAG CCCGAAGCGC CGCGAAGTCG GCCACGGCCG TCTGGCCAAG CGCGCACTGA TTCCGGTGCT GCCGAAGGAC GACGAATTCG CTTACACGAT CCGTCTGGTG TCGGAAATCA CCGAGTCGAA CGGCTCGTCG TCGATGGCTT CGGTGTGCGG CGGTTCGCTG GCACTGATGG ATGCTGGCGT GCCCCTCAAG GCGCACGTGG CCGGCGTGGC CATGGGCCTG ATCCTCGAAG ACAACAAGTT CGCCGTGCTG ACCGACATCC TGGGTGACGA AGATCACCTG GGCGACATGG ACTTCAAGGT CGCGGGTACC GACGCAGGTA TCACCGCGCT GCAGATGGAC ATCAAGGTGC AGGGCATCAC CAAGGAAATC ATGCAGGTGG CGCTGGCGCA AGCCAAGGAA GGCCGTCTGC ACATCCTGGG CAAGATGCGG GCCGCCATGG GCGGCGCTCG CACCGAGCTG TCGGAGCACG CTCCGCGCAT GATCACCGTC AAGATCAATC CGGAGAAGAT CCGCGACGTG ATCGGCAAGG GCGGTTCGAC CATCCAGGCG CTGACCAAGG AAACCGGCTG CACGATCGAC ATCCAGGAAG ACGGCACGAT CACCATCGCG TCGACTTCGT CGGAAGGCAT GGCCGAAGCC AAGCGTCGCA TCGAAGGCAT CACGGCCGAG GCCGAAGTGG GCAAGATCTA CAACGGTACG GTTCTGAAGC TGCTGGACTT CGGCGCGATC GTGAACATCC TGCCGGGCAA GGACGGTCTG CTGCACATCT CGGAAATCGC CAACGAGCGC GTGAACCAGG TTTCCGACTA TGTGAAGGAA GGCCAGGCCG TGCGCGTGAA GCTGCTGAGC ACCGACGAGA AGGGCCGCAT GCGTCTGTCG ATCAAGGCTG CCAAGGCTGA AGAAGGCGAC GTGCCTGCCG CTGCACCGCA AGCCCCGGGT GCTGGCGACG CTGCCTCGCA GCAACAACAG CAACAACAGC AGTAA
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Protein sequence | MTMFNKVVKE FQWGGHKVRM ETGEIARQAS GAVLLDMDDT VVLATVVGAK NPKPGQDFFP LTVDYLEKTY AAGKIPGGFF KREGRPSENE TLTSRLIDRP LRPLFPEGFY NEVQVVIHVL SMNPEVPADI PALVAASAAL AVSGLPFNGP VGAARVGYKD GQYLLNPNRA QLAHSDLDLV VAGTERAVLM VESEAQQLSE EVMLGAVVYG HEQMQIAINA IHELVRDGGK PEWDWQAAPK NEALVAKVSE LGLADLQAAY QLRQKSARSQ KLKEVYKSVA TKLAEAGVEA DGVEVDNILF ELESKIVRGQ ILNGEPRIDG RDTRTVRPIE IRSSVLPRAH GSALFTRGET QALVVATLGT KSDEQIIDAL QGEYRDRFML HYNMPPFATG ETGRVGSPKR REVGHGRLAK RALIPVLPKD DEFAYTIRLV SEITESNGSS SMASVCGGSL ALMDAGVPLK AHVAGVAMGL ILEDNKFAVL TDILGDEDHL GDMDFKVAGT DAGITALQMD IKVQGITKEI MQVALAQAKE GRLHILGKMR AAMGGARTEL SEHAPRMITV KINPEKIRDV IGKGGSTIQA LTKETGCTID IQEDGTITIA STSSEGMAEA KRRIEGITAE AEVGKIYNGT VLKLLDFGAI VNILPGKDGL LHISEIANER VNQVSDYVKE GQAVRVKLLS TDEKGRMRLS IKAAKAEEGD VPAAAPQAPG AGDAASQQQQ QQQQ
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