Gene Rpic12D_1865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1865 
Symbol 
ID8019521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1981881 
End bp1982768 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content68% 
IMG OID644830648 
ProductUrease accessory protein UreD 
Protein accessionYP_002981818 
Protein GI241663458 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.479381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCATC CCGATTTTCC TGTCCCGCCG CAGACCGATT CGTTCGCGTC CTGGGAAGCC 
TCGCTGCACC TGGCGTTTGC GCGGCGCGGT GAACGCACCG TGCTGGCCAC CTGCCGGCAT
CAGGGGCCGC TGCGGGTGCA GAAGGCGCTG TATCCGGAAG GCGAGGGCGT CTGCCATGCC
GTCATGCTGC ATCCGCCTGC AGGTATTGCC GGCGGCGATG TGCTCGATAT CGACATCGAA
CTCGGTGCCG ATGCGCATGC TGTGCTGACC ACGCCCGGCG CCACCAAGTG GTACAAGTCG
CTCGGCCGCA CGGCGACGCA GCGCGTTGCC ATCCGTGCGG AGGCGGGGGC GCGGCTCGAC
TGGCTGCCGC AGGAGAACAT CGTCTTCAAC CAGGCCCGCC CGATCATCGA CCTGACGCTG
GATCTGGCGC CGGGCGCCAG CGCCATCGGC TGGGACACCA CTATGCTTGG CCGCCACGCC
GCCGGTGAAT CGTGGGCCGA AGGCCGCATC GCCATGCGCA CCGCATTGCG TTGCAACGGT
CAGCCGCTGT GGATTGAATC GGCGGCATTC GACGCGCAAT CGCCCGTGCT GAATGCGACG
ACGGGCATGG CCGGCTTCCA CGTCGTCGGC ACGCTCTGGG CCGTCGGCGA GGGCGCCACC
GAAGCCCTCG CCGAATCGAT GGCCGAGCAC CTGCCGTACA ACGCCGGCCT GCGCGCGGGC
GTTACGTGTC TCACGCAAGA TGCGCCCGGC CTGCCAAACG TTTTGCTGCT GCGCGTGCTT
GCACGCCGGC CCGAAGATGC ACGCGCCCTG TTGTCGCAGA CATGGCTGGC GCTGCGCGAA
CCGATGCATG GCGTAGCGGG CCGTCCGCTG CGCCTCTGGT CTACATGA
 
Protein sequence
MRHPDFPVPP QTDSFASWEA SLHLAFARRG ERTVLATCRH QGPLRVQKAL YPEGEGVCHA 
VMLHPPAGIA GGDVLDIDIE LGADAHAVLT TPGATKWYKS LGRTATQRVA IRAEAGARLD
WLPQENIVFN QARPIIDLTL DLAPGASAIG WDTTMLGRHA AGESWAEGRI AMRTALRCNG
QPLWIESAAF DAQSPVLNAT TGMAGFHVVG TLWAVGEGAT EALAESMAEH LPYNAGLRAG
VTCLTQDAPG LPNVLLLRVL ARRPEDARAL LSQTWLALRE PMHGVAGRPL RLWST