Gene Rpic12D_1843 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1843 
Symbol 
ID8019499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1962815 
End bp1963468 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content60% 
IMG OID644830626 
ProductGlutathione S-transferase domain protein 
Protein accessionYP_002981796 
Protein GI241663436 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0625] Glutathione S-transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00779491 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTGACGC TATACGGTTT TGCCGCGAGC AACTACTACA ACAAGGTCAA GCTCGCCCTG 
CTGGAAAAGG GACTCCCTTT TGAGGAATCA CTGCGCTGGC CGGACCAGAC CGACGGCGAA
ATCTCGCCGC TGCACAAGGT GCCGTATCTG AAGGATGGCG ATCTCGGCAT GTGCGAATCG
CAGGTCATTG TCGACTATCT GGAGGCGCGT TATCCGGAGC ATCCGCTGGT TCCGGCCGAT
CCGTTCCAGG CAGCCAAGGT GCGAGAGGTG GTGACGTTCC TGGAGCTGCA TCTGGAACTG
GTCGCGCGCC AGCTGTTTCC CGAAGCGTTC TTCGGCGGCA AGATCAGCGA CAACCTGAAG
GTCAAGGTGC GCGAACAACT GCAGAAGAAC ATCCCGGCGG CGGCCAAGCT GTTCAAGTTC
TCGCCTTACG TAGCGGGCGA CACGTTCACC ATTGCGGACT GTGCGGCCAT CGTGCACTTC
CCGCTGGTGA GTCAGGCCAC CAAGATCATC TACGGTGAAG ACCTGCTGGC GCAGGTCGAA
GGCGTCAAGC CTTACCTGGC CAAAATGGCC GAGAACCCCA ACGTGCGGAA AGTGCGGGCA
GACAGCAAGG CCAATCTGGA GCAGATGCTG GCGCATTACG CCAGCAAGCG CTGA
 
Protein sequence
MLTLYGFAAS NYYNKVKLAL LEKGLPFEES LRWPDQTDGE ISPLHKVPYL KDGDLGMCES 
QVIVDYLEAR YPEHPLVPAD PFQAAKVREV VTFLELHLEL VARQLFPEAF FGGKISDNLK
VKVREQLQKN IPAAAKLFKF SPYVAGDTFT IADCAAIVHF PLVSQATKII YGEDLLAQVE
GVKPYLAKMA ENPNVRKVRA DSKANLEQML AHYASKR