Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1840 |
Symbol | |
ID | 8019496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1960274 |
End bp | 1961047 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830623 |
Product | hypothetical protein |
Protein accession | YP_002981793 |
Protein GI | 241663433 |
COG category | [S] Function unknown |
COG ID | [COG3022] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.360763 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0166065 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCG TCCTCTCGCC GGCCAAGTCG CTCGACTACG ACACGCCGCC GCGCACCAAG ACCCACACGC TGCCCGATTT CATCGAGCGC TCCGCAGAAC TCATTGACGT GCTTCGCAAG CTGTCGCCGG CCCAGATCGG CACGCTCATG CACATTTCCG ACCCCTTGGC GGCGCTCAAT GCCACGCGCT ATGCCGATTG GTCGCCCGAA TTCACTGCCG AAAACAGCAA GCAGGCCGCG CTGGCCTTCG ACGGCGATGT CTACGGCGGG CTGGATGCCA ACTCGCTGGC GGTGGACGAT CTGCAGTTCG CGCAGAAGCA TCTGCGGATC CTGTCGGGGC TGTACGGCGT GCTGCGCCCG CTCGACTGGA TGCAGCCGTA TCGCCTCGAA ATGGGCACGC GCCTGGCCAA TCCGCGCGGC AAGGATTTGT ACGCCTTCTG GGGCGACGAG GTGACCCTGG CGCTGAACAA GCTCTTCAAG CAGGACGACG ACGCCGTGCT CGTCAATCTG GCGTCGGAAG AGTATTTCAA GGTGGTGCGG CCCAAGGTGC TCAAGGCCCG CATCGTCACG CCGGTTTTTG AGGACTGGAA GAACGGCCAG TACAAGATCA TTTCGTTCTA CGCCAAGCGT GCGCGCGGTC TGATGGCGCG CTATGCGATC GAGCACCGCA TCACCGATCC GCGCAAGCTC AAGACGTTCG ATGTCGACGG CTATGCGTTT GTCGCTGCCG ATTCCGACGA CGAGCGCTGG GTCTTCCGCC GCAAGCTCAC CTGA
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Protein sequence | MIIVLSPAKS LDYDTPPRTK THTLPDFIER SAELIDVLRK LSPAQIGTLM HISDPLAALN ATRYADWSPE FTAENSKQAA LAFDGDVYGG LDANSLAVDD LQFAQKHLRI LSGLYGVLRP LDWMQPYRLE MGTRLANPRG KDLYAFWGDE VTLALNKLFK QDDDAVLVNL ASEEYFKVVR PKVLKARIVT PVFEDWKNGQ YKIISFYAKR ARGLMARYAI EHRITDPRKL KTFDVDGYAF VAADSDDERW VFRRKLT
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