Gene Rpic12D_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1840 
Symbol 
ID8019496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1960274 
End bp1961047 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content63% 
IMG OID644830623 
Producthypothetical protein 
Protein accessionYP_002981793 
Protein GI241663433 
COG category[S] Function unknown 
COG ID[COG3022] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.360763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0166065 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCATCG TCCTCTCGCC GGCCAAGTCG CTCGACTACG ACACGCCGCC GCGCACCAAG 
ACCCACACGC TGCCCGATTT CATCGAGCGC TCCGCAGAAC TCATTGACGT GCTTCGCAAG
CTGTCGCCGG CCCAGATCGG CACGCTCATG CACATTTCCG ACCCCTTGGC GGCGCTCAAT
GCCACGCGCT ATGCCGATTG GTCGCCCGAA TTCACTGCCG AAAACAGCAA GCAGGCCGCG
CTGGCCTTCG ACGGCGATGT CTACGGCGGG CTGGATGCCA ACTCGCTGGC GGTGGACGAT
CTGCAGTTCG CGCAGAAGCA TCTGCGGATC CTGTCGGGGC TGTACGGCGT GCTGCGCCCG
CTCGACTGGA TGCAGCCGTA TCGCCTCGAA ATGGGCACGC GCCTGGCCAA TCCGCGCGGC
AAGGATTTGT ACGCCTTCTG GGGCGACGAG GTGACCCTGG CGCTGAACAA GCTCTTCAAG
CAGGACGACG ACGCCGTGCT CGTCAATCTG GCGTCGGAAG AGTATTTCAA GGTGGTGCGG
CCCAAGGTGC TCAAGGCCCG CATCGTCACG CCGGTTTTTG AGGACTGGAA GAACGGCCAG
TACAAGATCA TTTCGTTCTA CGCCAAGCGT GCGCGCGGTC TGATGGCGCG CTATGCGATC
GAGCACCGCA TCACCGATCC GCGCAAGCTC AAGACGTTCG ATGTCGACGG CTATGCGTTT
GTCGCTGCCG ATTCCGACGA CGAGCGCTGG GTCTTCCGCC GCAAGCTCAC CTGA
 
Protein sequence
MIIVLSPAKS LDYDTPPRTK THTLPDFIER SAELIDVLRK LSPAQIGTLM HISDPLAALN 
ATRYADWSPE FTAENSKQAA LAFDGDVYGG LDANSLAVDD LQFAQKHLRI LSGLYGVLRP
LDWMQPYRLE MGTRLANPRG KDLYAFWGDE VTLALNKLFK QDDDAVLVNL ASEEYFKVVR
PKVLKARIVT PVFEDWKNGQ YKIISFYAKR ARGLMARYAI EHRITDPRKL KTFDVDGYAF
VAADSDDERW VFRRKLT