Gene Rpic12D_1828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_1828 
Symbol 
ID8019484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp1946306 
End bp1947082 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content63% 
IMG OID644830612 
Producttranscriptional regulator, GntR family 
Protein accessionYP_002981782 
Protein GI241663422 
COG category[K] Transcription 
COG ID[COG2188] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.49594 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCCTT CAGGCGGCGA AGGCGGCGCA TCGCCCGCTT CTGCGGGCGG CGCAGGCGGC 
TCTCCCACGT TCAGTCCGCT GTATCAGCAG ATCAAGACGC TGATCCTGCA AAGCCTGCAA
GCCGGCGAAT GGAAGCCCGG CGAAATGATC CCCAGTGAGA TGGAGTTGGC GGCCCGCTAC
AAGGTCAGCC AGGGGACGGT GCGCAAGGCG ATCGACGAGT TGGCGGCCGA AAACCTGGTC
GCGCGGCGCC AGGGCAAGGG CACCTTCGTT ACCACGCATT ACGAAGAAGG GGTGCAGTTC
CGTTTCTTGC GTCTGATGCC GGAGCAGGGC GAGCAGCACT ATCCCAGCAG CCGTGTGCTG
GAGTGCAAGC GCATGCGCGC CCCGGCTGAG ATCGCCCGTC TGCTCGAGCT CAAGGCCGGT
GACAGCGTCG TGCAGATCCG CCGCATCCTG TTCTTTTCGG GTGAGCCGAC CGTGCTCGAA
GAAATCTGGT TGCCAGGGGC GAGCTTCAAA GGGCTGACGG CTGAAAAGCT GACCGAGTGG
AAGGGCCCGA TGTACGCATT TTTCGAGGCG GAGTTTGGTG TGCGCATGTT GCGTGCCACC
GAGCGCATCC GGGCGGTGGC CGCTGACCCG ACCACGGCGG AGTTGCTGTC GGTGGCCGCT
GAATCGCCGC TGCTGTCAGT GGAGCGCGTG TCGCATACGT TCGGCGACAA ACCGGTGGAG
ATACGCCGTG GCCTGTACGT CACGACGCGG CACTATTACC AGAACGAATT GAATTAA
 
Protein sequence
MPPSGGEGGA SPASAGGAGG SPTFSPLYQQ IKTLILQSLQ AGEWKPGEMI PSEMELAARY 
KVSQGTVRKA IDELAAENLV ARRQGKGTFV TTHYEEGVQF RFLRLMPEQG EQHYPSSRVL
ECKRMRAPAE IARLLELKAG DSVVQIRRIL FFSGEPTVLE EIWLPGASFK GLTAEKLTEW
KGPMYAFFEA EFGVRMLRAT ERIRAVAADP TTAELLSVAA ESPLLSVERV SHTFGDKPVE
IRRGLYVTTR HYYQNELN