Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_1828 |
Symbol | |
ID | 8019484 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 1946306 |
End bp | 1947082 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644830612 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002981782 |
Protein GI | 241663422 |
COG category | [K] Transcription |
COG ID | [COG2188] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.49594 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCCTT CAGGCGGCGA AGGCGGCGCA TCGCCCGCTT CTGCGGGCGG CGCAGGCGGC TCTCCCACGT TCAGTCCGCT GTATCAGCAG ATCAAGACGC TGATCCTGCA AAGCCTGCAA GCCGGCGAAT GGAAGCCCGG CGAAATGATC CCCAGTGAGA TGGAGTTGGC GGCCCGCTAC AAGGTCAGCC AGGGGACGGT GCGCAAGGCG ATCGACGAGT TGGCGGCCGA AAACCTGGTC GCGCGGCGCC AGGGCAAGGG CACCTTCGTT ACCACGCATT ACGAAGAAGG GGTGCAGTTC CGTTTCTTGC GTCTGATGCC GGAGCAGGGC GAGCAGCACT ATCCCAGCAG CCGTGTGCTG GAGTGCAAGC GCATGCGCGC CCCGGCTGAG ATCGCCCGTC TGCTCGAGCT CAAGGCCGGT GACAGCGTCG TGCAGATCCG CCGCATCCTG TTCTTTTCGG GTGAGCCGAC CGTGCTCGAA GAAATCTGGT TGCCAGGGGC GAGCTTCAAA GGGCTGACGG CTGAAAAGCT GACCGAGTGG AAGGGCCCGA TGTACGCATT TTTCGAGGCG GAGTTTGGTG TGCGCATGTT GCGTGCCACC GAGCGCATCC GGGCGGTGGC CGCTGACCCG ACCACGGCGG AGTTGCTGTC GGTGGCCGCT GAATCGCCGC TGCTGTCAGT GGAGCGCGTG TCGCATACGT TCGGCGACAA ACCGGTGGAG ATACGCCGTG GCCTGTACGT CACGACGCGG CACTATTACC AGAACGAATT GAATTAA
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Protein sequence | MPPSGGEGGA SPASAGGAGG SPTFSPLYQQ IKTLILQSLQ AGEWKPGEMI PSEMELAARY KVSQGTVRKA IDELAAENLV ARRQGKGTFV TTHYEEGVQF RFLRLMPEQG EQHYPSSRVL ECKRMRAPAE IARLLELKAG DSVVQIRRIL FFSGEPTVLE EIWLPGASFK GLTAEKLTEW KGPMYAFFEA EFGVRMLRAT ERIRAVAADP TTAELLSVAA ESPLLSVERV SHTFGDKPVE IRRGLYVTTR HYYQNELN
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